XLOC_033451 (si:ch211-42c5.5)


Basic Information

Item Value
gene id XLOC_033451
gene name si:ch211-42c5.5
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007118.7
NCBI id CM002891.2
chromosome length 74282399
location 7570701 ~ 7575010 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00065479
AGATGAGAAGGAACACACTTCTTCAAGAAAATCCATCAGTAAATCATCTAAACGCAAACGACAAAGTTCTGACACAGCTGTTAAAGTGCTCACAGAAGTTGAGGAGGAACACACTTCTGCTTCAAGAAAATCCGTCAGTAAATCATCTAAACGCAAACGACAAAGTTCTGACACAGATGAGAAGGAACACACTTCTTCAAGAAAATCCATCAGTAAATCATCTAAACGCAAACGATTAAGTTCTGACACAGATGAGAAGGAACACACTTCTTCAAGAAAATTTGTCAGTAAATCATCTAAACGCAAACGACAAAGTTCTGACACAGCTGTTAAAGTGCTCACAGAAGTTGAGGAGGAACACACTTCTGCTTCAAGAAAATCCGTCAGTAAATCTGCACATAAAAACAGACTTTTAGAATCAGAGTTCTCAGAGGATGAATCTTTCATGCAACCATCTATAAAATCTGgaaAGAAAGCCCCTAAGAGGCCATGGAGTCCCGAGGAACAGTTGGCCGTAAAAGATACAATGCGCAAGTTTCTTGCATTAAGAAAAGTACCTGGGATGGCAGATTGCCTGTCATGTCTGGACAAAAATCCTGTTCTAGGCTCAAGATCGTGGCGTGACATAAAAAACTTTGTACATAATACGATTCAGAGTATGAAAAAGAAACTTGCCACAATTACTTATTAGGTGCTggagtaaaattttattttagttactatTTTTTGTTTCTTAAGGTAAATGACATTATTAGCATTTCTACAGAAATTATGTTTTAAGAGTCCACCTTTATATTGTACATTTGTACTTCATTACAAATCATTTACTTACAG

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000105378

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00065479 True 834 mRNA 0.37 7 7570701 7575010

Neighbor

gene id symbol gene type direction distance location
XLOC_033450 NA coding upstream 7413 7554760 ~ 7563288 (+)
XLOC_033448 nit1 coding upstream 61954 7495034 ~ 7508747 (+)
XLOC_033447 BX324230.2 coding upstream 74814 7469762 ~ 7495887 (+)
XLOC_033446 NA coding upstream 147778 7420212 ~ 7422923 (+)
XLOC_033445 si:ch211-168d1.3 coding upstream 197642 7279903 ~ 7373059 (+)
XLOC_033452 ino80b coding downstream 121655 7696665 ~ 7707218 (+)
XLOC_033453 CABZ01030292.1 coding downstream 197155 7772165 ~ 7772378 (+)
XLOC_033454 CABZ01030291.2 coding downstream 203953 7778963 ~ 7779176 (+)
XLOC_033455 CABZ01030282.1 coding downstream 266941 7841951 ~ 7855635 (+)
XLOC_033456 si:dkey-185m8.2 coding downstream 749496 8324506 ~ 8341388 (+)
XLOC_033444 NA non-coding upstream 290805 7275851 ~ 7279896 (+)
XLOC_033443 NA non-coding upstream 295313 7265682 ~ 7275388 (+)
XLOC_033435 CU459024.1 non-coding upstream 872610 6697973 ~ 6698091 (+)
XLOC_033457 NA non-coding downstream 769709 8344719 ~ 8352307 (+)
XLOC_033460 CR382283.1 non-coding downstream 853944 8428954 ~ 8429919 (+)
XLOC_033463 NA non-coding downstream 1048935 8623945 ~ 8626684 (+)

Expression


Co-expression Network