XLOC_033577


Basic Information

Item Value
gene id XLOC_033577
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007118.7
NCBI id CM002891.2
chromosome length 74282399
location 18872511 ~ 18872717 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00068564
ATGACTCAAATATGGATAAAACCTGATGTGAGCCAATCAGGTAACGAGTTAAAAAGTGCCTCTCTTGCTTACCAATCAGAGAACTCCTATTACTTTCATTCAGTGAATTAACAGAAACATATAAGGGGAGACGTATTAACAAATTAAGAAGCTGATtacacactgccttttttgttgataagaaaaaaaaaaaaagaagtgcactGC

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00068564 True 207 lncRNA 0.34 1 18872511 18872717

Neighbor

gene id symbol gene type direction distance location
XLOC_033576 NA coding upstream 262893 18607976 ~ 18609618 (+)
XLOC_033575 cd248a coding upstream 505244 18364176 ~ 18367267 (+)
XLOC_033574 rce1a coding upstream 684992 18176162 ~ 18187519 (+)
XLOC_033573 NA coding upstream 749361 18117625 ~ 18123150 (+)
XLOC_033572 rab1ba coding upstream 756119 18100996 ~ 18116392 (+)
XLOC_033578 focad coding downstream 6256 18878973 ~ 18983431 (+)
XLOC_033579 zgc:194252 coding downstream 116524 18989241 ~ 18990075 (+)
XLOC_033580 CU972454.1 coding downstream 135123 19007840 ~ 19008579 (+)
XLOC_033581 CU972454.2 coding downstream 142050 19014767 ~ 19015511 (+)
XLOC_033582 CU972454.5 coding downstream 143306 19016023 ~ 19054323 (+)
XLOC_033561 NA non-coding upstream 1314664 17557560 ~ 17557847 (+)
XLOC_033546 CU179702.1 non-coding upstream 1525372 17346399 ~ 17347139 (+)
XLOC_033541 CU929054.1 non-coding upstream 1831189 17023289 ~ 17041322 (+)
XLOC_033583 NA non-coding downstream 146463 19019180 ~ 19024925 (+)
XLOC_033584 CU972454.3 non-coding downstream 153597 19026314 ~ 19027070 (+)
XLOC_033585 NA non-coding downstream 300480 19173197 ~ 19173962 (+)

Expression


Co-expression Network