XLOC_033585


Basic Information

Item Value
gene id XLOC_033585
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007118.7
NCBI id CM002891.2
chromosome length 74282399
location 19173197 ~ 19173962 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00068566
gaaaacaaatgaacaaaatgtacacggaccTATAAcactattattacttttttttttaaattgtcacaCTTCCCTTGTTGCAAAAACGTAATgtctgtattgtttgtttttatatttttatccagtgtgcgaattatacattgacatgTACATTGTCAAATTTTTCGGTAAGTTAATGTAatatgcttcagtgaatcaaatatatgtatttatttaaaagacatctaatttattaataaatgtatttaagttttcagtgttctGTGGGATAGACTATCTAGTGCGTGGGTGTCCTAACTCGGTCCtggagccggtgtcctgcatagtttagctccaacttccttcaacacacctccctggaagtttctagtatacctagaaagagcttgattagctgattcaggtttgtttaattggagttggaactaaaatatgcaagacaccggccctccaggactgtgtttggaCACCACGGATCTAGAGTATTCTGACCTGGGGTGTGTTTACCAAACAACAtcataactcgtggctgaactattaTACTAGGATGCATCGTttaggaaaagaacgatgtagtgatgattgtttcccaaaacctgtagtttctctgtcgcagatccatcgtttgaacgtTGTTAGTTATAAagtaaaacacccataatgatgctctaaacggggtggagtaactacttctttagagaagaaccccataatttttaaaaaagtaaaatccaatattagatttggtaataacatgcactcgttt

Function

GO:

id name namespace
GO:0006272 leading strand elongation biological_process

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00068566 True 766 lncRNA 0.36 1 19173197 19173962

Neighbor

gene id symbol gene type direction distance location
XLOC_033582 CU972454.5 coding upstream 118874 19016023 ~ 19054323 (+)
XLOC_033584 CU972454.3 coding upstream 146127 19026314 ~ 19027070 (+)
XLOC_033583 NA coding upstream 148272 19019180 ~ 19024925 (+)
XLOC_033581 CU972454.2 coding upstream 157686 19014767 ~ 19015511 (+)
XLOC_033580 CU972454.1 coding upstream 164618 19007840 ~ 19008579 (+)
XLOC_033586 snrpf coding downstream 200721 19374683 ~ 19378024 (+)
XLOC_033587 AMDHD1 coding downstream 215342 19389304 ~ 19401501 (+)
XLOC_033588 si:ch211-212k18.6 coding downstream 250895 19424857 ~ 19477650 (+)
XLOC_033589 si:ch211-212k18.7 coding downstream 308122 19482084 ~ 19491627 (+)
XLOC_033590 si:ch211-212k18.8 coding downstream 321417 19495379 ~ 19502294 (+)
XLOC_033577 NA non-coding upstream 300480 18872511 ~ 18872717 (+)
XLOC_033592 NA non-coding downstream 338803 19512765 ~ 19514903 (+)
XLOC_033598 NA non-coding downstream 462767 19636729 ~ 19638389 (+)
XLOC_033599 NA non-coding downstream 490074 19664036 ~ 19664661 (+)
XLOC_033613 NA non-coding downstream 1208103 20382065 ~ 20642913 (+)
XLOC_033615 NA non-coding downstream 1279164 20453126 ~ 20464807 (+)

Expression


Co-expression Network