XLOC_033592


Basic Information

Item Value
gene id XLOC_033592
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007118.7
NCBI id CM002891.2
chromosome length 74282399
location 19512765 ~ 19514903 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00068804
CAGGACTGTAGTTCCAGCCTGGGATGCTGAGGCTCTGCATGTGGAGATTCTGAGGAAGCACAACCGGATGAACAGACGGTCCACTAAACGTCTCTCTCTGATTCAGTAGCTTCTCTGTGTGTGGAGAAATAAGGGGCTGGTCAATGGCCATAACCACTGGTCTGTGCTGCAGCTCCACTGCCTCCTGCTGATAGATGGATGACAATGAATCAGGAGAGCCCAGCATCATCCAAAGAACGGGCCGCACCACAGATGAGTCATTCAGGGTCAGGTTATAACCCTGATTCCACTCCTGGTTGTTCCAGAGCCGCCTATGAAGC

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00068804 True 320 lncRNA 0.52 2 19512765 19514903

Neighbor

gene id symbol gene type direction distance location
XLOC_033591 si:ch211-212k18.9 coding upstream 6312 19502744 ~ 19506453 (+)
XLOC_033590 si:ch211-212k18.8 coding upstream 10471 19495379 ~ 19502294 (+)
XLOC_033589 si:ch211-212k18.7 coding upstream 21138 19482084 ~ 19491627 (+)
XLOC_033588 si:ch211-212k18.6 coding upstream 35115 19424857 ~ 19477650 (+)
XLOC_033587 AMDHD1 coding upstream 111264 19389304 ~ 19401501 (+)
XLOC_033593 ttc5 coding downstream 13362 19528265 ~ 19538406 (+)
XLOC_033594 si:ch211-212k18.5 coding downstream 37478 19552381 ~ 19558842 (+)
XLOC_033595 slc7a7 coding downstream 47142 19562045 ~ 19587542 (+)
XLOC_033596 casp23 coding downstream 85359 19600262 ~ 19604900 (+)
XLOC_033597 si:ch211-212k18.15 coding downstream 100153 19615056 ~ 19621629 (+)
XLOC_033585 NA non-coding upstream 338803 19173197 ~ 19173962 (+)
XLOC_033584 CU972454.3 non-coding upstream 485695 19026314 ~ 19027070 (+)
XLOC_033583 NA non-coding upstream 487840 19019180 ~ 19024925 (+)
XLOC_033581 CU972454.2 non-coding upstream 497254 19014767 ~ 19015511 (+)
XLOC_033580 CU972454.1 non-coding upstream 504186 19007840 ~ 19008579 (+)
XLOC_033598 NA non-coding downstream 121826 19636729 ~ 19638389 (+)
XLOC_033599 NA non-coding downstream 149133 19664036 ~ 19664661 (+)
XLOC_033613 NA non-coding downstream 867162 20382065 ~ 20642913 (+)
XLOC_033615 NA non-coding downstream 938223 20453126 ~ 20464807 (+)
XLOC_033618 NA non-coding downstream 996858 20511761 ~ 20517831 (+)

Expression


Co-expression Network