XLOC_033758


Basic Information

Item Value
gene id XLOC_033758
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007118.7
NCBI id CM002891.2
chromosome length 74282399
location 27044529 ~ 27048457 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00068855
CGAGAGTGCTGCCTCTGACGTGTGCCCCCTAGATGCGGCCGCGCTTTGTTTCAAACAGGTGCGCTTAATTATCCGGACAGTGCAAAGAAAAAGTCCTTTGGTAACTTTATAACTGCAGTTGAACACATACCTCGTGGACTCTTTGGTATCTGTTCGTTACCTTTCTGGACTTTTAACATTCGATATCTGTGCATGGATGGTCAGAAGGATCTCGGATTCCATCCCAAGCATCCGAAGCGGATGAAGGCATCGAGGGTTTGTAACGACTTGAAGCATTGTGAGCTGCTGGCAGTGCTGAGGAAACCATCACGATACTGCAGAGCAGCGCAGGTCTGAAGGGATAAGACACAGGAGACGGAAGACCTTTTAAGTGGTATTACAGAAAGCCCCTAATTCAAACAAGCCTATTAGCTCTGCTCTGTTCGAGACATATGGCGTTTTTTTTCTGGCACGCTGGGGGCATCACATACAATACGGTCAGATCCCGTGGTGCCTCTGTAGGGTTTTCGTTTTGTCAGtcatatttttttcccaattcaaCTCGAGCACTCCGTATTGTCAGTCAAAGCCAAAGGGACATGAAAATGCTGACACGGTATCAAAGTGCCCTCTGTAGATGTCATTtttccttttgtcttttttttttttttacatgagcaGGAATTTTAGAGGGCTTAGGATATGAACGCAAATGTCTTATTGTGAATCATCCACCCTCATGTGTCTACTGGATTTTAAATTATGGGTTTCACTTAACTGaccaaa

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00068855 True 765 lncRNA 0.45 2 27044529 27048457

Neighbor

gene id symbol gene type direction distance location
XLOC_033756 rps13 coding upstream 516 27041315 ~ 27044013 (+)
XLOC_033757 BX927397.1 coding upstream 687 27043715 ~ 27043842 (+)
XLOC_033755 caprin1a coding upstream 23226 26998169 ~ 27021303 (+)
XLOC_033754 ext2 coding upstream 151916 26844261 ~ 26892613 (+)
XLOC_033753 tspan18a coding upstream 207247 26762717 ~ 26837282 (+)
XLOC_033759 plekha7b coding downstream 10873 27059330 ~ 27231592 (+)
XLOC_033760 sox6 coding downstream 201555 27250012 ~ 27454645 (+)
XLOC_033761 cyp2r1 coding downstream 406864 27455321 ~ 27697234 (+)
XLOC_033762 BX005056.2 coding downstream 749364 27797821 ~ 27799035 (+)
XLOC_033763 copb1 coding downstream 754023 27802480 ~ 27820976 (+)
XLOC_033752 CR394555.1 non-coding upstream 288347 26750471 ~ 26756182 (+)
XLOC_033748 NA non-coding upstream 428359 26611727 ~ 26616170 (+)
XLOC_033746 NA non-coding upstream 502106 26534014 ~ 26542423 (+)
XLOC_033744 NA non-coding upstream 650146 26388429 ~ 26394383 (+)
XLOC_033764 NA non-coding downstream 773987 27822444 ~ 27832323 (+)
XLOC_033765 BX005056.3 non-coding downstream 777488 27825945 ~ 27826061 (+)
XLOC_033768 BX005056.1 non-coding downstream 864481 27912938 ~ 27913055 (+)
XLOC_033769 BX072554.2 non-coding downstream 1205187 28253644 ~ 28258626 (+)

Expression


Co-expression Network