XLOC_033762 (BX005056.2)


Basic Information

Item Value
gene id XLOC_033762
gene name BX005056.2
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007118.7
NCBI id CM002891.2
chromosome length 74282399
location 27797821 ~ 27799035 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00066053
CCGGCCACGCACGACAGCACCGGCCTGAGGGACGGAGACAGGCAGCCGAGGCTGGTGAAGGACAGCAGCCACACCAGGCTGGCGAAGACCAGGATCAGGACGCTGTGTTTGAGTTTGAGAGTGGGGACGAGAGTGAGCAGACCCACGCAGCCCAGCACAAACAGCAACCTGCCCATCATCTGCATCTGATGGTGCTCCTCTCCCCACTGCAACAAGCGCACGACCATCAAATCCCCCAAGTAGCATGATGCTGGCAAAGACAAAAGCCAACATCTGCTGCTCTCCCTCTTGGTCCGCCTCAGGTAGAGGGTGAGGAAGAAATACGCGCAGCCGATGCTGAATAAAGGACTGACGGACTGGGAGAAATCCAAGAGGAAAGTCCGCAGCTCCAAGACGCCGTGTTCACTCTGAAAGCTCCTGGAAACGAAACAGGAGAGCGCCAGAACTGCCAGCGCTCCCACGTAGATAGCCGAGCCGCGGAATAGTTTGGACTTGAGGATATCCTCGTTGCAAAACCTGCAGACGTTGAATAAAAAGCCCCTCGGATGGTCTTGTTTTAACGGAGTGACGCAGCTCTTCACATAGCCGTTCCTGAAGCTCTCCGCGCTGTTTGCATTGCCAACAACACCATCGTGCTGCTGCTGTCTGATTTTACTGTGCAAAACCTCTCCTTCCTCCCGCACAGCCATGTTGTCCTCCTTCGGTGCTCTTTAAACTTTCATTCCTCCGAAATAAATCCTACGTGTGTCAACGTTTCACTACATGACGGCGAACGCGCTCCATGGTCACTCAAACGTGCTCAGGCATTTTGGCCAGGAGGAAAAGAGGctgaaatgttgttgttttttagcaGACCCGAGCTCTATGTCGCCGTCTAGGTGCGACAATTTGTAACAATGACTAGAGCGCGAGACACAGacgcgcgcgcgcgctctgcagCGCAACCAAACCGCCGAGCTCTTTATTCACCTCTCTATTTGTCGAGTTTTTCTACATTAATCAAGGTGTTTAAATAATACTACACTATATTGGTAGATAGAATGTAGCTCGAGATCTTATTAAATTATACAGTCTATCTATGCCCTGTGTGTGGGAGTGAGAGTGTTAGAAATTGAAACTTCAGCGTCTTGTGTaacacatttattgtttttattgttaatacgACTCTGGGATATGATTGAATAACATGATTTTAGTAGCTTAATGGAAAAAGTA

Function

GO:

id name namespace
GO:0031090 organelle membrane cellular_component

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000105566

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00066053 True 1215 lncRNA 0.50 1 27797821 27799035

Neighbor

gene id symbol gene type direction distance location
XLOC_033761 cyp2r1 coding upstream 100587 27455321 ~ 27697234 (+)
XLOC_033760 sox6 coding upstream 343176 27250012 ~ 27454645 (+)
XLOC_033759 plekha7b coding upstream 566229 27059330 ~ 27231592 (+)
XLOC_033758 NA coding upstream 749364 27044529 ~ 27048457 (+)
XLOC_033756 rps13 coding upstream 753808 27041315 ~ 27044013 (+)
XLOC_033763 copb1 coding downstream 3445 27802480 ~ 27820976 (+)
XLOC_033764 NA coding downstream 23409 27822444 ~ 27832323 (+)
XLOC_033765 BX005056.3 coding downstream 26910 27825945 ~ 27826061 (+)
XLOC_033766 rras2 coding downstream 35095 27834130 ~ 27887883 (+)
XLOC_033767 tub coding downstream 99056 27898091 ~ 28189681 (+)
XLOC_033757 BX927397.1 non-coding upstream 753979 27043715 ~ 27043842 (+)
XLOC_033752 CR394555.1 non-coding upstream 1041639 26750471 ~ 26756182 (+)
XLOC_033748 NA non-coding upstream 1181651 26611727 ~ 26616170 (+)
XLOC_033746 NA non-coding upstream 1255398 26534014 ~ 26542423 (+)
XLOC_033768 BX005056.1 non-coding downstream 113903 27912938 ~ 27913055 (+)
XLOC_033769 BX072554.2 non-coding downstream 454609 28253644 ~ 28258626 (+)
XLOC_033770 BX323591.1 non-coding downstream 662428 28461463 ~ 28461578 (+)

Expression


Co-expression Network