G1467308


Basic Information

Item Value
gene id G1467308
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 57641249 ~ 57641480 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1678296
GTATGAGCTccggtcaatgaggcctacagaccataaatagcaaatagaagttcaaaacgtgTAATGTTCACAataacttaagttgataaaaatatcttacacaacattaggtgataatatatgtattattatggatttataatcagctataatggggctgtcattttggaccgggaagacagaattaattaacatgaaactaacacaacaggagggttaaagctgatctacc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1678296 True 232 lncRNA 0.34 1 57641249 57641480

Neighbor

gene id symbol gene type direction distance location
LOC110494206 LOC108254821 coding upstream 95767 57498305 ~ 57548178 (+)
LOC110493228 LOC106583273 coding upstream 166682 57468753 ~ 57474567 (+)
tegt LOC100196653 coding upstream 311522 57305804 ~ 57329727 (+)
LOC110494190 LOC106565431 coding upstream 336698 57275277 ~ 57304551 (+)
LOC110494189 LOC106565429 coding upstream 367248 57238260 ~ 57274001 (+)
LOC110494197 LOC106565496 coding downstream 14469 57655949 ~ 57665568 (+)
LOC110494203 LOC106565438 coding downstream 42365 57683845 ~ 57688188 (+)
LOC110494205 LOC106565438 coding downstream 52696 57694176 ~ 57697563 (+)
LOC110494199 LOC106565440 coding downstream 63940 57705420 ~ 57712033 (+)
LOC110494196 timeless coding downstream 82191 57723671 ~ 57757730 (+)
G1467307 NA non-coding upstream 410 57640567 ~ 57640839 (+)
G1467159 LOC106565433 non-coding upstream 86769 57478797 ~ 57554480 (+)
G1467206 NA non-coding upstream 167927 57473088 ~ 57473322 (+)
G1467315 NA non-coding downstream 7733 57649213 ~ 57649433 (+)
G1467338 NA non-coding downstream 52170 57693650 ~ 57693953 (+)
G1468149 NA non-coding downstream 63323 57704803 ~ 57705010 (+)
G1468161 NA non-coding downstream 72188 57713668 ~ 57713907 (+)
G1468176 NA non-coding downstream 82586 57724066 ~ 57724291 (+)
G1467219 NA other upstream 26949 57589865 ~ 57614300 (+)
G1467031 NA other upstream 490906 57149303 ~ 57150343 (+)
G1467030 NA other upstream 493508 57146488 ~ 57147741 (+)
G1469076 NA other downstream 865817 58507297 ~ 58507885 (+)
G1470607 NA other downstream 2460412 60101892 ~ 60104007 (+)
G1471723 LOC100380707 other downstream 3330998 60972478 ~ 60999063 (+)
LOC110494283 LOC106565563 other downstream 3914839 61555873 ~ 61558328 (+)
G1473171 LOC106581772 other downstream 5057023 62698503 ~ 62698815 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
striped catfish (Pangasianodon hypophthalmus) G256459 NA non-coding NC_047610.1 CM018556.1 17404139 ~ 17404370 (+)