XLOC_003429 (si:ch73-21d24.1)


Basic Information

Item Value
gene id XLOC_003429
gene name si:ch73-21d24.1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 23569869 ~ 23571593 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00006701
aatgggctatatgcacgcaTTACTTCCGCGTTTTGTCTAAGGCCGCGGTCCAGCTTCCGGTCTGGGTGATTTTAAGCGGAGGTAAACAGTATTATGGCAGAGTCGTCAATATTTACTCGCTGTTTGAGAGTAAATTATGGTCAACGATGTGCAAATGATTGTCCAGATGTGCTCTACAACATCGCAGAGCAAAGCTTGAGAAGGGTTTCAAGTTGTATGCATCTTCCTACCTGTGCAATTATGAAGGTAACATTATGAGATTCAGAGCTAGAAAATGTTATGTGTATCCTGGAGCGGACATCCGTCAGAAGATATATGCCATCATCTGCTAGTTAATAGCTCCTGCTCTTGTGTGGCTGAGAGtgggatatgcaaacatttggctgctttgcttttccagacagcccattactctgaaatgtgtaatgtgagttgtcacatgaacaattgtttggaatggatcaattatgtgttaagttccatgaaacagatgggtgatttatttatttatttaatatgtataaacccaaatacctctctatgcacaagttacagaagaagcacctgattcaagaaaacaactgattcaatgtcattgtttctgttcatctgaataaaatatttttttcaaaatgtta

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000102574

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00006701 True 638 mRNA 0.39 2 23569869 23571593

Neighbor

gene id symbol gene type direction distance location
XLOC_003428 BX571675.1 coding upstream 172484 23397270 ~ 23397385 (+)
XLOC_003427 csf1a coding upstream 272677 23265157 ~ 23297192 (+)
XLOC_003426 NA coding upstream 642681 22920469 ~ 22927188 (+)
XLOC_003425 CU861893.1 coding upstream 855738 22714015 ~ 22714131 (+)
XLOC_003424 si:ch211-86h15.1 coding upstream 939480 22623284 ~ 22630389 (+)
XLOC_003430 NA coding downstream 22756 23594349 ~ 23597671 (+)
XLOC_003431 nfasca coding downstream 132817 23704410 ~ 23884805 (+)
XLOC_003432 NA coding downstream 323936 23895529 ~ 23913499 (+)
XLOC_003433 cntn2 coding downstream 361423 23933016 ~ 23987682 (+)
XLOC_003434 chia.1 coding downstream 421705 23993298 ~ 24000171 (+)
XLOC_003369 CR854846.2 misc upstream 7446787 16122786 ~ 16123082 (+)
XLOC_003318 CR450764.6 misc upstream 10857873 12711700 ~ 12711996 (+)
XLOC_003317 CR450764.16 misc upstream 10875606 12693967 ~ 12694263 (+)
XLOC_003316 CR450764.11 misc upstream 10884270 12685304 ~ 12685599 (+)
XLOC_003315 CR450764.18 misc upstream 10889841 12679732 ~ 12680028 (+)
XLOC_003423 BX537143.1 non-coding upstream 970276 22596726 ~ 22599593 (+)
XLOC_003419 NA non-coding upstream 1666175 21902677 ~ 21903694 (+)
XLOC_003436 NA non-coding downstream 444242 24015835 ~ 24024576 (+)
XLOC_003440 NA non-coding downstream 489563 24061156 ~ 24083588 (+)
XLOC_003441 FP102969.1 non-coding downstream 544490 24116083 ~ 24151217 (+)

Expression


Co-expression Network