XLOC_034597 (CU179757.1)


Basic Information

Item Value
gene id XLOC_034597
gene name CU179757.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007118.7
NCBI id CM002891.2
chromosome length 74282399
location 17261616 ~ 17264309 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00067360
GCCACGCCCCCTGATATAAATAAAGCAGATTGGGTTCCTCATCTTAATCTCCTCGTTGGATCTAGACTGATATACAGCAATGGTGTGTTTATTAATTTCAGCAATGTTGATGGGTAAGTGTTACTGCACTAAAAATACCTTAATCATGCACAATTATGatctttaaaaacagattttgtgGGGCAATGTATTGTATGATTCTaggattttaaataaaacatgttatttctctggattttagGTTTGCTTTCACTTGTCAAATCTTCTCAGATAGTCAATATATCAGCTCAACCAGGAAAAAATTTTACTATTTGGTGTAAACACACCTCAAACACTGGAAAGACCATACACTGGTTCAAGCAGACACACGGTGCTGTTCCTGTTGACATTGTATACAAGATGATAAGCTACCAGCTTaaggaaatatatgtaaattatttaaatggttTTCAACAAGACCACTTTGTTATGTCtctaaacaaagaaaacacatcactaagtattttaaatgtggatatttctGATTCTGCTCTGTACTTCTGTGGTTGGGGCTCTTGGGAGATTGTGTTTGGGGATGGAGCACATCTAGACATTGAAGTGAAAAGCGAAGGATCTCTAAAAAATTAAACTGTCACAAATACGGTTACAAACACAAATACAGATCTTAAAGGGTCCGATTTCTACTAAGGACTGTCCTAGAAACATTTTCTATACGCTGACCTTTATTTTTGGTGGTATTATTGTTATTCTTCTGATCGTTACTCtcaccttttttattattaagatcagaaaaatacacaaaaaagATGAGGATCAGCATGCAACTCAACATcatgagGATGCTCATTCATTAGTGTATGCAGCTTTACGATTCTCAAAACAGAAAACCAGAAGAGCAGCCGGAGATAATGAAGATAGAGAAGTTATATGTTCTGCTACAAGATGACACCCAATCAATTAATGTAACCTAAGGTTTTGTCAAGGCTCTAATATTTATA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000103653

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00067360 True 998 polymorphic_pseudogene 0.35 5 17261616 17264309

Neighbor

gene id symbol gene type direction distance location
XLOC_034596 NA coding downstream 2804 17222537 ~ 17258812 (-)
XLOC_034595 dbx1a coding downstream 233601 17024602 ~ 17028015 (-)
XLOC_034594 BX088559.1 coding downstream 419500 16841999 ~ 16842116 (-)
XLOC_034593 e2f8 coding downstream 663404 16576246 ~ 16598212 (-)
XLOC_034592 csrp3 coding downstream 699414 16548219 ~ 16562202 (-)
XLOC_034598 nitr10a coding upstream 2595 17266904 ~ 17268111 (-)
XLOC_034599 nitr11a coding upstream 30744 17295053 ~ 17297156 (-)
XLOC_034600 nitr8 coding upstream 67814 17332123 ~ 17337345 (-)
XLOC_034601 CU179702.2 coding upstream 93775 17358084 ~ 17380310 (-)
XLOC_034602 nitr3a coding upstream 136136 17400445 ~ 17457872 (-)
XLOC_034591 NA non-coding downstream 912184 16347500 ~ 16349432 (-)
XLOC_034589 NA non-coding downstream 1038512 16222045 ~ 16223104 (-)
XLOC_034585 CT030144.2 non-coding downstream 1080024 16176847 ~ 16181592 (-)
XLOC_034610 CT030012.1 non-coding upstream 376879 17641188 ~ 17645750 (-)
XLOC_034615 CU457795.1 non-coding upstream 598116 17862425 ~ 17862540 (-)
XLOC_034617 CT027807.1 non-coding upstream 982728 18247037 ~ 18247691 (-)
XLOC_034627 NA non-coding upstream 1452451 18716760 ~ 18730474 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location