XLOC_034890


Basic Information

Item Value
gene id XLOC_034890
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007118.7
NCBI id CM002891.2
chromosome length 74282399
location 34686815 ~ 34725938 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00069254
ATGGAAGCTGGAGTCCATGTCTGCTTGCTGCTGATGCTCTTTTTGAGAGCCATTGACAGAAGAAGCAATCTCATCCTCTTGCCTTTTCTCCTCTGCCCCTTTTCCATCCTCCTCCTTTGTTATTTGCCCTTTTAGTTCAGTGGTAGGAGTGTCCTGAGCATGCATGTGTCCATTTGTGTTCGGGACATCAGAGGCTGGATCAAGCACTTCAGAGCATGCTGACTGGACTCTATTTTCAGAATTGCTGGTCACTATGGCCTCTTGCTCCCTCACAGTTTTGGCCTTGACCTCCTCTTCCTCCACCCCTTTTTCTTGAACACTGGTTTGTTTCTTCTCATCTGTTTCTACAGGGGAGCTGACCTCCTCCTGAACTTGCACGTCAGACTTGGGCGTAGCATCTACTAGACCTGTTTGTGAAGTCTCAACTTCCTCTTGCCTACACACTGCCACTACATCATTCTCATCAGTTTTGATTTCTGCCTCGCTACTGCTTTTCTTTTCTACCATTTCAGCCCCCTTACAAGGTGGCATTCCAGCTACGTTTTGTACTGCACGTTCTTCCTTTGTCTGAAGTTCCACCTCTGTCTGGTTGATTCTGTCCTCAGGAGACTCTGTCCCCACCTGACCCTGTGAAATGAGTGTAACTGGACTCTCCCCAGGCACTGTGGTGACAGAAACTAAGGCTACATGCTCACTATACAGAGCAGCTGTAACAGACCCACCATCTTCTTCTGCAATGGGACTTAAATCACCAACAGATTCATTCGTGTTATGAGAACTGCTACTGAATGTCTGATGGTCTTCTTTTATGCTCAGCAGCTTCACACACCCAGAG

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00069254 True 835 lncRNA 0.48 2 34686815 34725938

Neighbor

gene id symbol gene type direction distance location
XLOC_034889 tex9 coding downstream 180769 34496113 ~ 34506046 (-)
XLOC_034888 si:zfos-1897c11.1 coding downstream 211119 34472363 ~ 34475696 (-)
XLOC_034887 NA coding downstream 217847 34464407 ~ 34468968 (-)
XLOC_034886 nr1h3 coding downstream 238739 34414194 ~ 34448076 (-)
XLOC_034885 madd coding downstream 273417 34317401 ~ 34413398 (-)
XLOC_034891 NA coding upstream 47659 34773597 ~ 34777267 (-)
XLOC_034892 NA coding upstream 60638 34786576 ~ 34792906 (-)
XLOC_034893 nfatc3a coding upstream 97595 34823533 ~ 34927961 (-)
XLOC_034894 CR356247.1 coding upstream 252413 34978351 ~ 34978469 (-)
XLOC_034895 galr1b coding upstream 253235 34979173 ~ 35036770 (-)
XLOC_034881 NA non-coding downstream 450635 34235518 ~ 34236180 (-)
XLOC_034877 NA non-coding downstream 599784 34079036 ~ 34087031 (-)
XLOC_034876 NA non-coding downstream 609278 34068391 ~ 34077537 (-)
XLOC_034869 NA non-coding downstream 1074599 33463428 ~ 33612216 (-)
XLOC_034896 NA non-coding upstream 326396 35052334 ~ 35058077 (-)
XLOC_034900 NA non-coding upstream 403429 35129367 ~ 35133970 (-)

Expression


Co-expression Network