XLOC_034896



Basic Information


Item Value
gene id XLOC_034896
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007118.7
NCBI id CM002891.2
chromosome length 74282399
location 35052334 ~ 35058077 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00069260
GTTTAAAACAGATAACTTCTAGCAAACATAGTGTAAAGTAACTTCCCTTATTGATAGCTTTGTTCATCCACAGGCTTGAAAGGAACATCCACAAGTTAAACGATCATAGGAGAGAGGAAACATCCACAGAAGTTTTGTTTATCCAGGAGCTTGAAAGGAACATCCACAAGTTAAACGATCATAGGAGAGGGGAAACATCCACGGAAGAAGGCAAGTCAAGGAGAAGTTGGACACAGAAGATCAAAACTTCCAAGTCAGTGGATCTTACCTTGAATGCCAGCCCACCTGGGAATGACACTGACAACCTATCTACCACCCAAAGACTGGTAGATGCATTTTTGGGACTTCAAAAACTATTTGTTAAACCTTATAATtctataatatgttatattacaCTTCTGATGTAggaaaataatgagaaaaatatAAAGATTAG

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00069260 True 436 lncRNA 0.37 3 35052334 35058077

Neighbor


gene id symbol gene type direction distance location
XLOC_034895 galr1b coding downstream 15564 34979173 ~ 35036770 (-)
XLOC_034894 CR356247.1 coding downstream 73865 34978351 ~ 34978469 (-)
XLOC_034893 nfatc3a coding downstream 124373 34823533 ~ 34927961 (-)
XLOC_034892 NA coding downstream 259428 34786576 ~ 34792906 (-)
XLOC_034891 NA coding downstream 275067 34773597 ~ 34777267 (-)
XLOC_034897 zgc:112160 coding upstream 4055 35062132 ~ 35066457 (-)
XLOC_034898 agrp coding upstream 22413 35080490 ~ 35083585 (-)
XLOC_034899 hsd11b2 coding upstream 53975 35112052 ~ 35126374 (-)
XLOC_034900 NA coding upstream 71290 35129367 ~ 35133970 (-)
XLOC_034901 NA coding upstream 129824 35187901 ~ 35190917 (-)
XLOC_034890 NA non-coding downstream 326396 34686815 ~ 34725938 (-)
XLOC_034887 NA non-coding downstream 583366 34464407 ~ 34468968 (-)
XLOC_034907 NA non-coding upstream 457056 35515133 ~ 35518051 (-)
XLOC_034908 NA non-coding upstream 643585 35701662 ~ 35705517 (-)
XLOC_034910 NA non-coding upstream 886439 35944516 ~ 36024346 (-)

Expression



Co-expression Network