XLOC_034897 (zgc:112160)


Basic Information

Item Value
gene id XLOC_034897
gene name zgc:112160
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007118.7
NCBI id CM002891.2
chromosome length 74282399
location 35062132 ~ 35066457 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00067878
GTCTTCGTGTCTACAATGGCTTTCCTGTGGCTGCTGTCCTGTGTTGCCTTCTTTAGTGCAGCCTATGGCTGTGGCGTTCCTGCCATTCCTCCTGTTGTCAGTGGTTATGCCCGCATTGTGAACGGTGAGGAGGCAGTGCCTCACTCCTGGCCCTGGCAGGTGTCTCTGCAGGACTTCACTGGCTTCCACTTCTGTGGAGGCTCTCTGATCAATGAGTTCTGGGTTGTTACTGCTGCTCACTGCAGTGTGAGAACTAGTCACCGTGTGATCCTGGGAGAGCATAACAAGGGAAAGAGCAACACTCAGGAGGACATCCAGACAATGAAAGTGTCTAAAGTGTTCACCCATCCTCAGTATAACTCTAACACCATTGAGAATGACATTGCTCTGGTCAAGCTGACTGCACCAGCCTCTCTGAATGCCCATGTGTCCCCTGTTTGCCTGGCTGAGGCTTCAGATAACTTTGCCTCTGGCATGACCTGTGTGACTTCTGGATGGGGTGTGACCAGATACAATGCTCTGTTCACCCCTGATGAGCTCCAGCAGGTCGCTCttccactgttgtccaatgaagATTGCAAGAACCACTGGGGAAGCAACATCCGGGACACCATGATTTGCGCAGGTGCTGCTGGTGCCTCCTCCTGCATGGGTGACTCTGGTGGTCCTCTGGTCTGTCAGAAGGATAATATCTGGACTCTGGTGGGTATTGTGTCCTGGGGCAGCAGTCGTTGTGACCCTACTATGCCTGGCGTGTACGGCCGAGTCACCGAGCTCCGTGACTGGGTGGATCAGATTCTGGCctccaactaaataaataaaatgtacagccAATCTTTGGCATCactgaattgtatttttttatttttgagaacaACAATCAAAACCAAAGAAAATGTATAGGATTTCAATTGACTTATCTGATAATAGCAACACTTTTTGTGCTTCCCAACATACATTTTACTCACTGCGAGTAACTAATCATTCCAAAACTTTGACCAAACAGCTTATTAATGCTAAAATGAGCGTTGCATGTTGCTTATAGTCAACATACTTTCTAAAGTGGATAATCAAAAACAAGTCTATTCTAGTTTGTCTATACACAGTTTGGGTAATGTTAACACTATCTTAAAGAGAAATGAAATTTACTCAACATTTATTTGCTCGCAAGTGGTATCAAGCCTTTattacttctgttgaacaaataAGAAACTATTTCAAAGAAAGCTGACAACccctaaccattgacttccatagtaggaaaaacaaatgataCTATGGAATTAAACCGTTTTCTAGCTTTCTTAAATCTTCTGTttggtttaacagaagaaataaacttatATTATTAACTCAAATAAAAAGGTTTGATGACTGAAAATGATGACGGAATttaagtttttgggtgaactatccctttaattgagGTAAAACCATAGCTGTTATAACTTTTTTGTAAtctaaatatttcttttttaagaaatagCCTGTCATGAAATGCCATATTCTGCAACAAAAAGGTCTCTGTAATGAGTAATGTAACATGCTTCAtcataatggaatttaaataaaaacatgagcTACAGTA

Function

symbol description
zgc:112160 Predicted to enable serine-type endopeptidase activity. Predicted to be involved in proteolysis. Orthologous to human CTRB1 (chymotrypsinogen B1) and CTRB2 (chymotrypsinogen B2).

GO:

id name namespace
GO:0006508 proteolysis biological_process
GO:0005575 cellular_component cellular_component
GO:0004252 serine-type endopeptidase activity molecular_function
GO:0016787 hydrolase activity molecular_function
GO:0008233 peptidase activity molecular_function
GO:0008236 serine-type peptidase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-050417-229 Predicted to enable serine-type endopeptidase activity. Predicted to be involved in proteolysis. Orthologous to human CTRB1 (chymotrypsinogen B1) and CTRB2 (chymotrypsinogen B2).

Ensembl:

ensembl_id ENSDARG00000039730

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00067878 True 1588 mRNA 0.42 7 35062132 35066457

Neighbor

gene id symbol gene type direction distance location
XLOC_034896 NA coding downstream 4055 35052334 ~ 35058077 (-)
XLOC_034895 galr1b coding downstream 25362 34979173 ~ 35036770 (-)
XLOC_034894 CR356247.1 coding downstream 83663 34978351 ~ 34978469 (-)
XLOC_034893 nfatc3a coding downstream 134171 34823533 ~ 34927961 (-)
XLOC_034892 NA coding downstream 269226 34786576 ~ 34792906 (-)
XLOC_034898 agrp coding upstream 14033 35080490 ~ 35083585 (-)
XLOC_034899 hsd11b2 coding upstream 45595 35112052 ~ 35126374 (-)
XLOC_034900 NA coding upstream 62910 35129367 ~ 35133970 (-)
XLOC_034901 NA coding upstream 121444 35187901 ~ 35190917 (-)
XLOC_034902 slc12a4 coding upstream 216428 35282885 ~ 35314347 (-)
XLOC_034891 NA non-coding downstream 284865 34773597 ~ 34777267 (-)
XLOC_034890 NA non-coding downstream 336194 34686815 ~ 34725938 (-)
XLOC_034907 NA non-coding upstream 448676 35515133 ~ 35518051 (-)
XLOC_034908 NA non-coding upstream 635205 35701662 ~ 35705517 (-)
XLOC_034910 NA non-coding upstream 878059 35944516 ~ 36024346 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000026_08294878_08297151 NA coding CI01000026 null 8294683 ~ 8297603 (-)