CI01000026_08294878_08297151


Basic Information

Item Value
gene id CI01000026_08294878_08297151
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000026
NCBI id null
chromosome length 17172400
location 8294683 ~ 8297603 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000026_08294878_08297151.mRNA
AATGCATCAAAAAGAGTATCAAATTACATGTGAACCTTCCAGTGGAGAATTAGTTGGCAAAATATTCAGTTAGTTATTAATTTATTAATTATTTTTTCTAAAAAGCAAACTCAAGCAACAAATAAAATAATGAATTAAACAATTTAAAAAAATTTTTTTTAAATAAAATAATTAAAAATCAATCAAACAGAAGTGCTTAATAGCACATTTATGAAGTTTTACCCGGTTTATTCGAAAATGCAATGTACTTTTCATGTTAAACATGGCAATGTTTAAGTACAGTGGGGTAAAAATCATGGGATTCTGCACAGGTGAAGACCAGCTGATGCAGACTCTCAGGGTTAATTTTTGACCATAACATCATGTTGTCGTGCCCTCATTGGTATGTGTGAAATCATGGTTTGGTGTTAAATAGGACTTTCTGCCATCAATAATGCTGTGTCTTCTGCAAAATGTCTCTCCTGTGGCTGCTGTCCTGCGTTGCCTTCATTAGTGCAGCCTACGGCTGTGGCGTTCCTGCCATTCCTCCTGTTGTCAGTGGCTATGCCCGCATTGTGAATGGTGAGGAGGCAGTGCCTCACTCCTGGCCCTGGCAGGTCTCCTTACAGGACTTCACTGGCTTCCACTTTTGCGGTGGCTCTCTGATCAGTGAGTACTGGGTCGTGACTGCTGCTCACTGCGGTGTGAGAACTAGTCACCGTGTGATTCTGGGAGAGCATAACAAGGGAAGCCTCAACACTCAGGAGGCCACGCAGACTATGAGAGTGTCAAAAGTGTTCACTCACCCTCAGTGGGACTCTAATACCATTGAGAATGACATTGCCTTGATCAAGCTCACTGCCCCTGCCTCACTGAACACACATGTGTCTCCTGTTTGTCTTGCTGAGACTTCAGACCAATTTGCTTCTGGCACGGTCTGCGTGACTTCTGGCTGGGGAGTGACCAGATACAATGCTCTCTTCACCCCTAATGAGCTCCAGCAGGTCGCTCTGCCTCTGTTGTCCAACGAGGACTGTAAGAGCTACTGGGGAAGCAACATCCATGATGTCATGATTTGTGCTGGTGCTGCTGGTGCCTCCTCTTGCATGGGTGACTCTGGTGGTCCTCTGGTCTGTCAGAAGGGTAATGTCTGGACACTGGTGGGTATTGTGTCCTGGGGAAGCAGTCGTTGTGACACCAGTATTCCTGGTGTGTACGCCCGTGTCACTGAGCTCCGTGACTGGGTGGATCAGATTCTGGCTTCCAACTAAAGACACAAAATGTATAGAGACTCCTTGACATCATCATTGAACAGCAGCTAACAAGATACTACAGCCACTCAAGGCTGTGAATTACAGTGGTTTTACCACACTTAAGAGGTGATGTTAAAACCAGCTTAATCGTGGTCAAACTAATGCTATGAGAGGCTTATTGCTTTTATATTATGGCTGTAATAGTTCAATAAA

Function

GO:

id name namespace
GO:0004252 serine-type endopeptidase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000026_08294878_08297151.mRNA True 1445 mRNA 0.44 7 8294683 8297603

Neighbor

gene id symbol gene type direction distance location
CI01000026_08254412_08284933 GALR1B coding downstream 9750 8254412 ~ 8284933 (-)
CI01000026_08150334_08189089 NA coding downstream 105594 8150334 ~ 8189089 (-)
CI01000026_07876455_07881355 TEX9 coding downstream 411946 7876340 ~ 7882737 (-)
CI01000026_07853925_07863410 NR1H3 coding downstream 431273 7853585 ~ 7863410 (-)
CI01000026_07786816_07835100 MADD coding downstream 459583 7785159 ~ 7835100 (-)
CI01000026_08308439_08310023 NA coding upstream 10678 8308281 ~ 8310023 (-)
CI01000026_08337806_08350476 HSD11B2 coding upstream 40127 8337730 ~ 8350818 (-)
CI01000026_08396549_08398206 NA coding upstream 97709 8395312 ~ 8398311 (-)
CI01000026_08501499_08526463 SLC12A4 coding upstream 203896 8501499 ~ 8526463 (-)
CI01000026_08591640_08612056 SLC6A2 coding upstream 293799 8591402 ~ 8612460 (-)
G131774 NA non-coding downstream 30229 8264184 ~ 8264454 (-)
G131768 NA non-coding downstream 44633 8248321 ~ 8250050 (-)
G131673 NA non-coding downstream 90294 8194927 ~ 8204389 (-)
G131668 NA non-coding downstream 120251 8166840 ~ 8174432 (-)
G131680 NA non-coding downstream 261705 8018193 ~ 8032978 (-)
G131743 NA non-coding upstream 1329 8298932 ~ 8299650 (-)
G131766 NA non-coding upstream 19039 8316642 ~ 8317696 (-)
G131785 NA non-coding upstream 65084 8362687 ~ 8362902 (-)
G131787 NA non-coding upstream 66252 8363855 ~ 8364157 (-)
G131788 NA non-coding upstream 66922 8364525 ~ 8364877 (-)
G130256 NA other downstream 1977529 6275511 ~ 6317154 (-)
G129750 NA other downstream 3475401 4785885 ~ 4820249 (-)
G129658 NA other downstream 3921614 4367296 ~ 4373069 (-)
G129476 NA other downstream 4623799 3670574 ~ 3670884 (-)
CI01000026_03439507_03490314 PDE3B other downstream 4804180 3438795 ~ 3490503 (-)
G131742 NA other upstream 9173 8306776 ~ 8307707 (-)
G132575 NA other upstream 1089548 9387151 ~ 9387716 (-)
G132721 NA other upstream 1252427 9550030 ~ 9550644 (-)
CI01000026_10347872_10351783 CEBPA other upstream 2050590 10347746 ~ 10351783 (-)
CI01000026_10788054_10788652 CD59 other upstream 2489736 10787339 ~ 10789709 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_034897 zgc:112160 coding NC_007118.7 CM002891.2 35062132 ~ 35066457 (-)