CI01000026_07876455_07881355 (TEX9)


Basic Information

Item Value
gene id CI01000026_07876455_07881355
gene name TEX9
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000026
NCBI id null
chromosome length 17172400
location 7876340 ~ 7882737 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000026_07876455_07881355.mRNA
ACGCGAGTTGTTTACCATCACTAGCTCGCCCACTAAATCTGCTGAGAGCGCGTGGTCGCGGGAAATCTTTCGCTCAATCCAAGACACAGACTTTTCACTTTCTGCACACTTTCACAAGAAGACAAAAATGCTCTTTGCCGATAAATAACTACTACAGTGTCCACGACAGACAAGACGAGCAACCAACCACAGATTTTAACATGCATCTGCTCAGTCCAAAACAAACAACTTTGACAAGTTCACTTATCCTTGTCATGTTAAAATAAAGAAATGGTGATTAGTTGATTGTAATGAGATTAGTTATTAAATAGACAGAGTTACTGTAGCCCTGAATGGAAACGAGGGGCCATCTAGAATAGAGCTAATTAGGATGGAGAACCTTCCATCCCATTAACCCCCCACATTTCCAGTAGCACTTATTTACTGGCCATTATTTCAGACTGACTTACCAGATTGAGTTCTTTATTTTTAGCTGCAACGCATTCGCCTCAGGCCCTTGCAGTCCTTGAACCGCAGAAGGTAAAAGTCCTACTCCAGGACCAGACTGCTGCTGGTCATCAGCCATCACGATGCGACTCTGTTGAGACGAGGATGGGGATCTAACAAGTAGGCCTTAACCTGAACCTGGAGAATGCAGCTTTCCTCCGTAAAAAGTACATCACGATCACTGCCTCTTGATTTCACTGACAAACTGGACTCGGCTCCAGTACATCACGTTGGTAATTCATGGTTTGTGGTTGCAGTTGAGGTCACTATCCCTGCGCGTGCATCAGGAGCAAGGAAACACTTCGAGTTGCAGCAGGTTCAGAGTCAGACACTACCTACCTAGCAGCTCACTGGCGACCACTGTGGAAGCTGCAGCTGGGACCACGCATGCGCACTGCGCCACCAGCGGAAACCCACACGAGGGTGCTGCAGCGAGTTCATCTAGTTCAGTAACATAATCACTCATGTTCTGAAGCATAACTGCCTGTCAGTAAGGATTGATAATATCTCTCTCATTGTTTTACAGGATTCCCCTCATATTCGATTGATTGTCTTTTTATCAGTCACATAAAGAATTCAACCTGGAGGTTGTGTTGGATTTTCCTGTCATGTATTGCAATAAATAAATAAATAAAATAACAAATTATCTGAAATACATGTACTTATTTATATTTTTTTGTTTATTGCTACGTAAATTAGGCAGTAAACGATGACATTTTTATTTTAAAAAATAGGGGTTAAAAGAATCAAGTGTGTACACATAAATTCGCCTCCTTGAACTGCATATGGCGTATAAATTTCTTTAAATAAATCTTTACTTAAAATGAAATGCCTCCGATGAAATGGGAAGGTAGACACTGTTGCTTAGCAACGGTGTGTCGACGCCACTAACAAACATGGCAGACCGTACACACAGACCCGCGCTACCTCCTTTAAAAAAGCCTCAAACGTCTTACTCAGAAAGGCCTTCCAGACCCAGACCTCAGAGCAGGTCTTCATCTGCTCCTTCAAAGAAACCACCACAAATGGACCTCTTAGCCAAAGAAGAGGAATACAAACGTCTCAATGCAGAGCTTGAAGCAAAAACAGCAGAACTTGTTCGGGAAGCAGAGAAAGTTATGATCATGAAAAACAAGAACTTCTCTGAAAAATCTTCAAAGGCAAGCAAGCCAGGCTCAGGAAATAAAAAGAATCCTCAAAAAGCAACACACACTGTGGTTGATGATGTTGCTATTCCTGAAGACTTTGGGGATTTCTCACTTGCTAAGACAATCAGCTCAATCGAGAACAGAGTTAGTGATGATCTCACTGAGGAACACTTGCAGGATGACATCATGCCCAGTGCTGGAGATGAGATGGGCGCAGAAGCTCAGATCAGATTTTTGAAGGCTAAACTTCGAGTAATGCAGGAAGAATTAAACAGACTCTCAAATGAATGCAACAAGAAGGAGGATGAAAACAGCACTTTAAGTAGTAAACTGAAGGACGTGGAGGAGGAAAGGGCAAGATTGCAGAGGACTACAAATGTCCAGCAGACTCAGGTTGAGAAGCAAAGAGCTTTAGCTGAAGAGTCCAGTCAGAAATGTGAAGGTCTGCAACAGCAAGTGGCAGCACTGCAAAAGGAGTTGGAAAGCATGAAGAGGACCCATAAGCAGGCAGCCAGTACACACAGTGCAACAGAAGTGCGGTTGAATAGAGCTCTGGAGGAGACTGAGAAGACTAAAACTCAGCTCAACAAACTCAAACAGAGCAGTAAGGATTCAATCAGTCAGGAGCACCAAAAGATAGAAACCCTACAAGCTGAGAACAGAAAGCTGGAAAGACAAAATGCTGAGCTCATCATGGGTTTTAAAAAGCAACTTAAGCTAATAGATATTTTAAAAAGACAGAAGATGCATTTTGAAGCGGCCAAGCTGTTGTCCTTCACTGAAGAGGAGTTCATGAAAGCTTTGGATTGGGGAAAGGATGGAGTCTCATAGCTTTCTATTTTGTACTTTGTAAATAGATTTAAAAATAGATGACGGTGGGTGTACAACATACAGTTTAAATTTCAAGAGCTCATTCACAGTTTAACAATCTTCAAACTTCAATAAA

Function

symbol description
tex9 Orthologous to human TEX9 (testis expressed 9).

NR:

description
LOC553441 protein, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000026_07876455_07881355.mRNA False 2580 mRNA 0.42 10 7876340 7882737

Neighbor

gene id symbol gene type direction distance location
CI01000026_07853925_07863410 NR1H3 coding downstream 12930 7853585 ~ 7863410 (-)
CI01000026_07786816_07835100 MADD coding downstream 41240 7785159 ~ 7835100 (-)
CI01000026_07738249_07739846 NA coding downstream 136452 7737842 ~ 7739888 (-)
CI01000026_07723366_07737315 DIS3L coding downstream 139025 7723114 ~ 7737315 (-)
CI01000026_07707119_07710156 CRYBGX coding downstream 165596 7707016 ~ 7710744 (-)
CI01000026_08150334_08189089 NA coding upstream 267597 8150334 ~ 8189089 (-)
CI01000026_08254412_08284933 GALR1B coding upstream 371675 8254412 ~ 8284933 (-)
CI01000026_08294878_08297151 NA coding upstream 411946 8294683 ~ 8297603 (-)
CI01000026_08308439_08310023 NA coding upstream 425544 8308281 ~ 8310023 (-)
CI01000026_08337806_08350476 HSD11B2 coding upstream 454993 8337730 ~ 8350818 (-)
G131574 NA non-coding downstream 150252 7725496 ~ 7726088 (-)
G131571 NA non-coding downstream 161165 7714949 ~ 7715175 (-)
G131568 NA non-coding downstream 163600 7712523 ~ 7712740 (-)
G131516 NA non-coding downstream 345344 7528998 ~ 7530996 (-)
G131447 NA non-coding downstream 646213 7229880 ~ 7230127 (-)
G131594 NA non-coding upstream 75034 7957771 ~ 7958806 (-)
G131680 NA non-coding upstream 135456 8018193 ~ 8032978 (-)
G131668 NA non-coding upstream 284103 8166840 ~ 8174432 (-)
G131673 NA non-coding upstream 312190 8194927 ~ 8204389 (-)
G131768 NA non-coding upstream 365584 8248321 ~ 8250050 (-)
G130256 NA other downstream 1559186 6275511 ~ 6317154 (-)
G129750 NA other downstream 3057058 4785885 ~ 4820249 (-)
G129658 NA other downstream 3503271 4367296 ~ 4373069 (-)
G129476 NA other downstream 4205456 3670574 ~ 3670884 (-)
CI01000026_03439507_03490314 PDE3B other downstream 4385837 3438795 ~ 3490503 (-)
G131742 NA other upstream 424039 8306776 ~ 8307707 (-)
G132575 NA other upstream 1504414 9387151 ~ 9387716 (-)
G132721 NA other upstream 1667293 9550030 ~ 9550644 (-)
CI01000026_10347872_10351783 CEBPA other upstream 2465456 10347746 ~ 10351783 (-)
CI01000026_10788054_10788652 CD59 other upstream 2904602 10787339 ~ 10789709 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location