CI01000026_07723366_07737315 (DIS3L)


Basic Information

Item Value
gene id CI01000026_07723366_07737315
gene name DIS3L
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000026
NCBI id null
chromosome length 17172400
location 7723114 ~ 7737315 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000026_07723366_07737315.mRNA
GAGACGGACAGAAGCAGAATTCCACAACACTGTATCAAATCCCTGATCACAAGGATAATGACACAGAAGAAGCCAGTTCTGGCGGACCCATTGCTACAACGCCACCTCCTATGATTGCACTTAATTCTAGTCCTGACCCCTCAGATACTTCAACAGATTCCAGTGAAACACATACAGAGGAGACAGCCACAAATACCACCACACCAGAGCCGGAGCACACAAATCAATCTGCTCTTAATGACACATATACCAGTCCAAAACCTGAGACGAACACAACAGAGAGCAGCCTTGACGAATCGGGTTCTGGATATTTGCCCTCAGATGATGTGCCCACCAACAGCACTACTAAGAGTCCGGCCACCACAACAAAAGATGAGAGCATCCAGTACAAAACTACAGTGAGTCCAACTGAACCACCAGTATACGGAACAACAACACCAGAGATTCCACCTCCCATCCCTGAGGACACCACTACACCTGCCCCAGAGAGTGAGGACACAGGAGCAGACCCAACCGGATCTTTTGACAACAAAGATAATTCTGAAAGAGGTTTATCCTCAGATGTTACAGATGCTACTGAAAACAGGAAAGGACAGGCATGGGCTATAGTCCTAGCTGTTGGGATTGTAGTGGGGATCATTGCCTTGGCAGCATTTATCATCCTGAATCGAAGGAACAGAAGAGACTTTTCACACAGAAAACTGGTGGAAGAGACGTCACCTGATCCAGTTCTCCGACTGGATAACAGTGAGCCACTAGACCTGAAGTTTGATGGATTTGGTTACTACAATCCAGGACTACAAGGAGATAACATCCAGATGACCAACTTTCCACAGGGACGCTCAAAGGGTAGAAAGGTCCGTGTGGTTCGGGAGCATTATGTGAGGCAGCAGGTGCCGTGTGGGAACTCGTTCTGTCAAGCGAACTGTCACAACGTTGGGAAGGTGCTGTCTAGTGATGTGACCCACTATGTGGTTCCGGATGTGGGAGTAGTTCGGGATTTCCTGGAGATTCTGGAGTTCAGGGAGCTGCAGGGTATCGTTTTGACCCAGACAGCCTACCAGACTGTTCAGCACACGCGTGGACGCAGGCACTATAACAGACTGCGTGCTTTACTGAAGGATCCTCGCCACGATTGCGTACTGTTTGCAAATGAGTTTCAGCAATATTCCTACTGTCCCAGAGACAAGGGTGAGTCTCAAGACAAATGGAATACGAGAAAAGTGTACAATGCAGCAGTTTGGTACTATAATCATCTGGCTGGACTCCGGCCAGTGGTCATGATTACAGAAGATACTGACACTATTTTAGAATATAGTGCCTTAAACAGCGGAGTGTATGTCATCTCAACTCAGGCCGCCCATGATCTGTACAACTCCATTGCTCAGACCCTTCAAGAGCGAGAGAGTGAGGGAGCAGAGAAGGTGTACGGTGAACACCTGCCTGCGGAGGTGCTTGAGGCTGGTATAAAATCTGGCAGGTACATCCAGGGCATTCTCAGCGTGAACAAACATCGGGCACAGCATGAAGCCTTTGTCCGTTATGAGGGTTCAGCCAGCAAAAATACAGAGCTAAACAGCGATGTGCTGATCAGTGGAGCGAAGCACCGTAACCGAGCAGTGCATGGAGATATGGTTGTCATAGAGCTTTTGCCCCGTAATGAGTGGAAGGGCAGGACTATGGTGCTAACAGAAGGTCAGGGGGAGGAGCGGGTACAGGAGGACATCCAGAGTCAGCCCTTGCCCACAGGCAGGGTGGTGGGTATTCTGCAGAGGAACTGGAGAGACTACGTTGTGACATTTCCTCCTCTTGAGGAGGTGCAGTCTCAGAGCCGAAATTCACAGAAGATTCTGGTTATTCCATGGGACTACCGCATACCTAAAATCCGTATCAGCACACAGCAGGCTGAGGCACTGCAGGACCAAAGAGTAATTGTGCGTCTGGATTCATGGGAGAGTACTTCTGTCTACCCAAATGGCCATTGTGTGAGGGTTCTGGGAAAAGCAGGTGAGCTGGAGACTGAGATTCAGACCATCCTGGTGGAGAACTGCATCCATGTGCCACCATTCTCAGAGGCACAGTTGCGAGAGATGCCAGTTAACACAGAGGAGAACCCATGGCAGATGGACAGCAGTGAGGTGTCTTCTCGACGGGACCTGAGAGAGACGCATCTAGTGTTCAGTATCGATCCTAAGGGCTGTGAGGACGTGGATGACACCTTGTCTGTACGGACTTTGCCTGGGGGTAAACGGTTAGAGCTGGGTGTCCACATTGCCGATGTCACTCACTTTGTCAGGGAGGGCTCTCTTACAGACCTAGAGGCACGGTCCAGGGCAACCACTTACTACCTTGCTGACCGGAGGTATGACATGCTGCCAGCAGTGTTGAGTGCTGACCTGTGCTCCCTCCTTGGAGGAGTGGACCGATATGCCATGAGTGTGTTGTGGGAGCTGGATGCTGAGTCTCTGGATGTGTGTACAGTTTGGTACGGTCGCACTCTTATCCGCTCCTCCTATCAGCTTCACTATGAGCTGGCCCAGAGCCTGCTGAATGGCGATGAGGTCGAGGTGCCTGAGCTAGCCGAGCTCAAGGGTTCACAGCGGGACCAAAAACTAGCTGAGCTCATGCAGGCCCTGGAGACTCTGACGAGGGTAGCCAGGCACCTTCGGGCACAGAGAGATAAGGGTGGTGCTCTGGAGTTGGAGGGGGTGGAGGTTAGGGCTCAGCTGGATGAGGAGAAGAACATTACAGCCCTTGTGCCTAAACAGCCTTTGGAGGTTCATGAGACTGTGGCAGAGTGCATGATCCATGCCAACCACTGGGTGGCACGCAAGATACAGGAAAGCTTTCCACATCAAGCACTTCTGCGTCATCACCCACCACCCAAACAGGAGTTCTTCAGTCAGCTAATCGACAGTGCCAAGGCCCGTGGCTTCAGTATTGATACAAGGTCAAACAGGGCTCTGGCTGATTCTCTGGAGCGCGCTGTGGATCCTCAGGACCCCCTGGTGAACAGGATGTTGAGAATGATGGCCACACAGGCGATGTCTAATGCTCTTTACTTCTCTACAGGAGCCTGTCCAGAGGAACAGTACTATCACTATGGTCTTGCACTGGATCGATACACTCACTTTACCTCTCCAATCAGACGCTACGCTGATGTATTAGTTCACCGGCTGCTCATGGCTGCCGTTCAGCTGGAGAAGGAAGGATCACTAAGCAAAGCTTTGGACAGTAACAAAGAACTTGAGGAGCTGGCTCAACATATCAACAATAAAAACAGAGCAGCGCAGCACGCACAGAAGCAGTCCACGGAGCTCTTCCAGTGCCTCTACTTCAGAGACAAAGACTCCAGCACAGATGAGCGCTGTGTGGCTGATGCTGTGATCTACGCCATCCGAGCTAATGGTTTTCTTGCCTTCGTACCACAGTATGGTGTGAAGGGAGCCGTGTACCTTAAGGATCGAGAGGGTCAGGTGGTCAGTGTTGATGGAAATGGAAGATGTGAGTGGAAGACTGGGATATTACAGAGATACCCTGACAGGATCAACACCTGCACCAGCACTGGAACTCATACCTTTCACCTCTTCGACCACGTTACAGTCCGTATCTCTGTAGAACCGTCTCGTTGCCATGCCGACGGCTTGTGTCTGCAGCTTATCAGCAACAAGCCCCATTGCGCTGCGCAACCTGAGTCCCAGCCAGCTGGTCGAGGTCGGTCTGAGCTGGTTCAGGAAGTCGTGCGCTGGGCAGAAGAGGCCTCTCTCCAGGCAGAGGAAGAGAAAGGGAGGAAGCCCAAACTGAGCAGGGAGGAGAGGAAGTTCAGGCAGAGCAGAACACCAAACCTCTATGTCCTGTTACAGGAGATCAGTGAACTTGCCCTGCTGGATCTGTCTTTATGCCAAATCAGAAATTCAGAGGAACAGACTTCTACTGCATCTTCTTAGCTTTATACTGCTGTTACTACAATTGACTAGACACAATACTCTACACAGAAAGCTTTAGGGATGGTTTTGTAATATTTGCTAGATTTAGGCCTGCCATGAAGTGTCCAGATGTGAAATAACTAGAGTTATACCTACTCAGGATTTATGAACCCTGGCTCCTTTGCATTGTCTAATACTTGATTTCATAAGGGAAAACATTGGGTCTTCCTGATACAATTTGATTTGAGATTATTTCTCAAAATGACTAATAAA

Function

symbol description
dis3l Predicted to enable 3'-5'-exoribonuclease activity. Predicted to be involved in rRNA catabolic process. Predicted to act upstream of or within RNA phosphodiester bond hydrolysis, exonucleolytic. Predicted to be located in cytoplasm. Predicted to be part of cytoplasmic exosome (RNase complex). Orthologous to human DIS3L (DIS3 like exosome 3'-5' exoribonuclease).

GO:

id name namespace
GO:0005737 cytoplasm cellular_component

KEGG:

id description
K18681 DIS3L; DIS3-like exonuclease 1

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000026_07723366_07737315.mRNA True 4199 mRNA 0.50 20 7723114 7737315

Neighbor

gene id symbol gene type direction distance location
CI01000026_07707119_07710156 CRYBGX coding downstream 12370 7707016 ~ 7710744 (-)
CI01000026_07681254_07684511 SMAD6A coding downstream 38603 7681026 ~ 7684511 (-)
CI01000026_07625890_07661161 SMAD3 coding downstream 61334 7624704 ~ 7661780 (-)
CI01000026_07537510_07596897 MAP2K5 coding downstream 125766 7537160 ~ 7597348 (-)
CI01000026_07519204_07523946 SKOR1A, SKOR1 coding downstream 199168 7519002 ~ 7523946 (-)
CI01000026_07738249_07739846 NA coding upstream 527 7737842 ~ 7739888 (-)
CI01000026_07786816_07835100 MADD coding upstream 47844 7785159 ~ 7835100 (-)
CI01000026_07853925_07863410 NR1H3 coding upstream 116270 7853585 ~ 7863410 (-)
CI01000026_07876455_07881355 TEX9 coding upstream 139025 7876340 ~ 7882737 (-)
CI01000026_08150334_08189089 NA coding upstream 413019 8150334 ~ 8189089 (-)
G131571 NA non-coding downstream 7939 7714949 ~ 7715175 (-)
G131568 NA non-coding downstream 10374 7712523 ~ 7712740 (-)
G131516 NA non-coding downstream 192118 7528998 ~ 7530996 (-)
G131447 NA non-coding downstream 492987 7229880 ~ 7230127 (-)
G131444 NA non-coding downstream 498246 7224428 ~ 7224868 (-)
G131594 NA non-coding upstream 220456 7957771 ~ 7958806 (-)
G131680 NA non-coding upstream 280878 8018193 ~ 8032978 (-)
G131668 NA non-coding upstream 429525 8166840 ~ 8174432 (-)
G131673 NA non-coding upstream 457612 8194927 ~ 8204389 (-)
G130256 NA other downstream 1405960 6275511 ~ 6317154 (-)
G129750 NA other downstream 2903832 4785885 ~ 4820249 (-)
G129658 NA other downstream 3350045 4367296 ~ 4373069 (-)
G129476 NA other downstream 4052230 3670574 ~ 3670884 (-)
CI01000026_03439507_03490314 PDE3B other downstream 4232611 3438795 ~ 3490503 (-)
G131742 NA other upstream 569461 8306776 ~ 8307707 (-)
G132575 NA other upstream 1649836 9387151 ~ 9387716 (-)
G132721 NA other upstream 1812715 9550030 ~ 9550644 (-)
CI01000026_10347872_10351783 CEBPA other upstream 2610878 10347746 ~ 10351783 (-)
CI01000026_10788054_10788652 CD59 other upstream 3050024 10787339 ~ 10789709 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_034882 dis3l coding NC_007118.7 CM002891.2 34241319 ~ 34256374 (-)