G131766


Basic Information

Item Value
gene id G131766
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000026
NCBI id null
chromosome length 17172400
location 8316642 ~ 8317696 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU149871
CGAAACAGGACTGTAAAATAAAAGCGAAATATTAGTTTATGCCCATTTATGTCTACAAAGATACCTACAGGGTAGTATTCAGCCACAGCTTTGACCTGCTCGTAATCATCCGCACGGGCTAGCTGTGCGAGACCCTCTGGGTAGAGCTTGCCACAGTGAGGGAAAAGTTTCGCTCTGTCTTCTTTGGAGAGCTCCGTACCAAAGGAGTTAATGGTAATGATGAAAGCCCTTCTGTCTGCCTCAAACTCCAGAATTGGACACATGGTGTCTGCAGTTGTTCCACCCAATGAGGAACAGAACTTGTAGAAAGCTTCTAGATAAGCCTAGAGACACAGACAGAAGATCAACAACAGCTCATGGTTTCATGCTTAAAAGCCAAACTCTGATAGAATACTGACATATTTTGTAATCTTATTTACCTTTATTGCTATTTTGTTATTTTTATTATTACTACCAAGTTTTCCATTATTTCTTGTGTTCGTCTTATCCTTTTTTATCTACTGTTTATATATTTAATGGACAGTCTAAGTAGCTGACCAGGTTTACATTTCACTGCAAGTTTTATTCTGTATACAACTGTGTATGTAACAAATTACAAATCTTGAATCAAAATAAGAGTTTAATCTACTTTATCATTTTTCCTGCTCAACAACAGTGCTGTTAAATAACGTTTTTGTAGCCAAGTCTTGGTATGTGCCTATACAGAAATCAATCTAACCTGAAAAATTGTGACAACTAGCCCCAGTTTCTCCTACATACATTGTCGAAGTTAGATCACTCCCTGCACATAATATCCAGACAAACCAGCGAGTTTCTGTGCTTAATTAAGCATATTTGTCATGCCATGTGAAAATTCCTAATGAACGTTCAAGATTTACGTCCCGGTATTTTCCATCCCAAGGCTGACCTTGTAAAGGGTGTTGCGAATTATTTCAATGTTCATCTCATCCAAATCCTGCTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU149871 True 961 lncRNA 0.38 2 8316642 8317696

Neighbor

gene id symbol gene type direction distance location
CI01000026_08308439_08310023 NA coding downstream 6619 8308281 ~ 8310023 (-)
CI01000026_08294878_08297151 NA coding downstream 19039 8294683 ~ 8297603 (-)
CI01000026_08254412_08284933 GALR1B coding downstream 31709 8254412 ~ 8284933 (-)
CI01000026_08150334_08189089 NA coding downstream 127553 8150334 ~ 8189089 (-)
CI01000026_07876455_07881355 TEX9 coding downstream 433905 7876340 ~ 7882737 (-)
CI01000026_08337806_08350476 HSD11B2 coding upstream 20034 8337730 ~ 8350818 (-)
CI01000026_08396549_08398206 NA coding upstream 77616 8395312 ~ 8398311 (-)
CI01000026_08501499_08526463 SLC12A4 coding upstream 183803 8501499 ~ 8526463 (-)
CI01000026_08591640_08612056 SLC6A2 coding upstream 273706 8591402 ~ 8612460 (-)
CI01000026_08620867_08632135 LPCAT2 coding upstream 302330 8620026 ~ 8632135 (-)
G131743 NA non-coding downstream 16992 8298932 ~ 8299650 (-)
G131774 NA non-coding downstream 52188 8264184 ~ 8264454 (-)
G131768 NA non-coding downstream 66592 8248321 ~ 8250050 (-)
G131673 NA non-coding downstream 112253 8194927 ~ 8204389 (-)
G131668 NA non-coding downstream 142210 8166840 ~ 8174432 (-)
G131785 NA non-coding upstream 44991 8362687 ~ 8362902 (-)
G131787 NA non-coding upstream 46159 8363855 ~ 8364157 (-)
G131788 NA non-coding upstream 46829 8364525 ~ 8364877 (-)
G131804 NA non-coding upstream 85871 8403567 ~ 8403786 (-)
G131805 NA non-coding upstream 87477 8405173 ~ 8405552 (-)
G131742 NA other downstream 8935 8306776 ~ 8307707 (-)
G130256 NA other downstream 1999488 6275511 ~ 6317154 (-)
G129750 NA other downstream 3497360 4785885 ~ 4820249 (-)
G129658 NA other downstream 3943573 4367296 ~ 4373069 (-)
G129476 NA other downstream 4645758 3670574 ~ 3670884 (-)
G132575 NA other upstream 1069455 9387151 ~ 9387716 (-)
G132721 NA other upstream 1232334 9550030 ~ 9550644 (-)
CI01000026_10347872_10351783 CEBPA other upstream 2030497 10347746 ~ 10351783 (-)
CI01000026_10788054_10788652 CD59 other upstream 2469643 10787339 ~ 10789709 (-)
G133790 NA other upstream 2516319 10834015 ~ 10859589 (-)

Expression


Co-expression Network