XLOC_035471 (tafa5l)


Basic Information

Item Value
gene id XLOC_035471
gene name tafa5l
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007119.7
NCBI id CM002892.2
chromosome length 54304671
location 10561922 ~ 10659477 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00069597
TCCGAATCCAGCCACGAACAACCGAGAATGTGCGCGAAATGCTTCACTGCTGTTCTCTGTAACTCCACAGGGCAAATTCTGCATGTATATATGGCTTGGGGAACGTCGGAGTGACATTGAAGAAGAGGAAGACGCATTTCTGAACACCCAGAACCTCCCTCTCCAGCTCATCTACAGTCAGCATCCGTACACCGTGGACCTGTTACCACCGGACTGGTACCACTGACCATTTCACCCTGTGTGGATACTTCTCCAGACCGCGGAGGATTTGCGCAAAATTCGAACGGACCAAATTATGACTCATTTTACTTTGCTTGGATGAGTTTTTAACACCTATTGCATTTGATTTGTCTGTCAGTATACGcgtattatatttttaaaaattctagtTTGGCCAAATAAGGATAAATAATGACTTTTTGATGACACTTCGTTCAAATTAAATAACGTTTTATCAAATGCGTAAAATGGAAACCAAAGCGCGTAAATTGACATCGGATTAACTCTCGCTTCGCATCCCGGCCACATTCCCGTGAAAATCTATGGAAGTAGCCGAGCTTGCTTTGAACTTGCTTTAGGCTGGGTGCCGGGAGTGTTTTCTGCGGGACGTGGTGAGGATGCAGTCGGGGATGCGGGCGCTCTGTGCCGGCGGAGGCGCGTCTCTCTGCTGCCTGCTTATGCTGTGGATGATCTACACCCACATCCTGAAAGAAGGTCAGTTGGCAGTAGGCACATGTGAGATAGTGATGTTGAATAGAGACAGCAGTCAACCCAAGCGCACTATCGCCAGGCAGACGGCCCGCTGTGCCTGCCGGAGAGGACAGATCGCTGGCACCACACGAGCCCGACCAGCATGCGTGGACGCACGGATAGTGAAAAGCAAGCAGTGGTGTGAGATGTCTCCGTGTTCAGAGGGTGAGATCTGCGGCCTGCTCTTCAACCGCTCCGGATGGACCTGCACCAAAGGCGGAGGACGCATTAAAACGGTCACG

Function

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-050419-194 No description available

Ensembl:

ensembl_id ENSDARG00000068100

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00069597 True 992 mRNA 0.50 3 10561922 10659477

Neighbor

gene id symbol gene type direction distance location
XLOC_035470 NA coding upstream 9377 10541514 ~ 10552545 (+)
XLOC_035469 NA coding upstream 38894 10522285 ~ 10523028 (+)
XLOC_035468 NA coding upstream 98174 10460994 ~ 10463748 (+)
XLOC_035467 tbc1d22b coding upstream 112251 10339869 ~ 10449671 (+)
XLOC_035466 pim1 coding upstream 253151 10304981 ~ 10308771 (+)
XLOC_035472 NA coding downstream 34940 10694417 ~ 10707185 (+)
XLOC_035473 mapk13 coding downstream 163592 10823069 ~ 10857042 (+)
XLOC_035474 FP085410.1 coding downstream 184475 10843952 ~ 10844068 (+)
XLOC_035475 brpf3b coding downstream 202876 10862353 ~ 10895273 (+)
XLOC_035476 NA coding downstream 242070 10901547 ~ 10950183 (+)
XLOC_035465 NA non-coding upstream 313779 10204093 ~ 10248143 (+)
XLOC_035464 NA non-coding upstream 388694 10168525 ~ 10173228 (+)
XLOC_035478 NA non-coding downstream 446029 11105506 ~ 11112567 (+)
XLOC_035479 NA non-coding downstream 659957 11319434 ~ 11319703 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) G63912 NA non-coding CI01000010 null 7842899 ~ 7898166 (+)