XLOC_035510 (acbd6)


Basic Information

Item Value
gene id XLOC_035510
gene name acbd6
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007119.7
NCBI id CM002892.2
chromosome length 54304671
location 14381272 ~ 14441812 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00069655
ATTACGGAAAACGTACTGTAGCAGCCAACTGTCTGTGccgtttttattactatttaataaCAACCAAAGcaaaaaatactgttaataaaCCCTGAAGGGTATCTTTATTCTCTTCAATGGCGTCCCGATCTCCATCATCCTCCCCAGACTCAGCGACGGGCTCCGGTACTGATCCAGCCCGGCCTGACACCGGAGAGCCACTCGGCGGAGGCTCTGACTCTGATTCCGATTTCGGATTAGGGAAATTTGATTGCAGTGCTGGCGATGCATCGGCTCGATTAGAAGGGGCAGATCTAGAGAATGAGTTTGAGTCTGCGGCAGACCGGGTCCGAGATCTCGTGCAGACAGCCAGTAGAGAACAGCTGCTGTATCTGTACGCCAGGTTCAAACAGGTCAAAGTTGGAAAGTGCAATACTTCAAAACCTGGTTTCTTCGATTTCGAGGGACAGAGAAAATGGTCGGCGTGGAAGCAGCTGGGGGACATGAGTACAGAACAGGCCATGCAGGAGTACGTGACCTGTGTACATGCCCTGGACCCAGAAGGCAGCCAGAAGTCTTCAGAGCGACGAGGAGGAGAAAAGCGAACTGGATTCGGTGGGCCAGCGGTTAGCTCTCTATACCAAGAGGAAAAGATAAGGGAAGAGGACAAAAACATTTTCGACTACTGTCGAGAGAACAACATCGAACACGTCAGCAAGGCCATCAGCTCCAAGACAGTGGACGTAAACACAAGAGACGAAGAGGGCCGAGCTCTCCTGCACTGGGCGTGTGACAGGGGCCATAAAGACCTGGTGTCTCTTCTCCTGCAAAATAATGCTGATATCAATAGTCAGGATGATGAAGGACAAACTGCTCTGCACTATGCCTCAGCTTGTGAGTTTGCAGAAATCGTCGAGTTACTCCTTAAAGCCGGAGCTGACCCATCTATCAAAGATCAAGAAGGCTCCCTTCCAGAGGAGGTGACAGAATCTAGTGCCATCTCTTCTCTCCTGCGCCAGTACACTGCTCCTAAAGGCTAAAGCCAACAATTTATTCACACTAACTGTGCTCCTCATCCAAATGGTGCAGACCTGCTGTAAAACCCACATCAGCTCAGCATTCAAGAACCAAACTCAATCAACTCAGCATACTTTAGTACCAAACTTAATCAACTCTACAACTGAACTCAACATTATAGACCTGAACTTTCTTTAGAATGAGCTGATGGAATTAAAAACCTCAATTTTATTACCACCAGCTCAGCATTTCAGAATTCAACTCAACATTTTAGAACTGAACTCCATTGGCTCATCGTTTCAAAACTGAAATCCATCAGCTCATCATGGTTTAAGAACAGTTCTAGAATGCTGAGTTGATGTAGTTCACATCTAGAATGAGGAGCTGATAGGAGGTTATTTCTCTGTGCATTCTGGAACTTGTAACCCAACTGGGTTTCTACAACTGATCTCAGTATTCTAGACCTGAACTGATCTCCATCAGCTCTTCATTCTAAAATAGATCTCGATCAGCTCTTCATTCTAAAACTGAACTCCATCACCTCGTTATTTTAGAACTGAACTCCATCCACTCAGTATACTAGAGCTGAACACCATCTGCTTTGCTTTTAGGAAGAGTTCTGACACAATAAGCTGGAGTTCAGTTCTAAAATGAGCTGATAGTTTAAAACCTCAACTTCACTCTACCAGCTCAGCATTCTAGAACAAAACTCAATATTCTACACCTAAACTCAGAACTCAACATCACCATTCTAGAACTGAACTCCATCACCTTTATTATTTTAGAACTGAACTCCATCAACTCAGCATTCTAGAACTCAACTCAACATTCTAGAACTGAACTTGGAACTGTACTTCACCATTCTAAAACTGAACTCCATTAGCCCATCATTCCAGAACTGAACTCCATTCTCATGACATTCTAGAGCTGATCTTCATCTGCTTAGTGTGGTTTAGGAACAGTTCTAGAATGCCAAATTTATTCAGTTCTGATCTAGAATAAGGATAAAGGTTATTTTTCTGTGCATTCTGGAACTGAATTCCTTCAGCTCTGCATTCTGGAACTTGTTTCATAAGTGGCTTTTTAAAACTGAACTTAGAACTGAACTCTAGCAGCTCTTTATTCTAGAACTGAACTTCATCACCCTAATATTTTAGAACTTAACTCTATCCACTCTGCAACACCATCTGCACAACTTTCTTTAGGAAGAGTTCTGAAACTATGAGCTGATAAGTTAAGAACCTTGATTTTACTCCATTAGTTAATCATCTAGAATTCAACTTAATATCCAGGAACTGAGAACTCTCCTTCATCATTCTAGAACTGAACTCCAATAGCTTGTCATTCTAGAACTGAACTCCATCAGCTCATCCTTATAGAAATGAACTCCATCAGCTCGTCATTTTAGAACTGAACTCCATCCTCATGACATTCTAGAGCTGATCTCCATCTGCTCAGCGTGGTTTAGTTCTAGAATGCTGAGTTGATGTAGTCAAAATCTAGTATGAGGAGCTTAAAGGAGGTTATTTCTCTGTAAATTCTGGAACTGAACATCGGCTCTGCATTCTGTAACTTTTTTCTCATACAGGTTTCTACAACTGAACTCAGTATTCTAAACCTGAACTTAGAACTGAACTTCATTATTTTAAAACGGAACTCCATCAGCTCATTATTTTAGAACTGAACATGCACTGTGCATTCTAGAGCTAAACACCATCTGCTCATCTTTCTTTAGGAAGAGCTCTAAAATGATAAGCTGATGGAGTTACAAACACTCCTCCAGCTCAGCATTCTAGAACTCAACTCTGCAttctagaactgaatttagaacaTTACTTCATCATTCTAGAACTCAACTCTATCAGCTCGTTTTTTTAGAACTGAACTCCATCCACTAGGCATTCTTGAGCTGAACTCCATCTGCTCAGCGTGGTTTTGGAACAGCTCTAGAATGCTGAGTTGATGTAGTTTAGATCTAGAATAAGGAGCTGATAGTTTTCCATCTGCTACGAATTCTAGAACTATTATTGTTGATTCCATTTGGCTGCGAAGCACAGACGTTATACTTTCAGTTAATTTCAGAAAACTTGTCCTCCCCGTCCTAGAATGGTACATTCCAATGAATGTGTTACTGTTGTTGctattaaaacatgcaaaattaaaaa

Function

symbol description
acbd6 Predicted to enable fatty-acyl-CoA binding activity and lipid binding activity. Predicted to be located in cytoplasm. Orthologous to human ACBD6 (acyl-CoA binding domain containing 6).

GO:

id name namespace
GO:0005737 cytoplasm cellular_component
GO:0000062 fatty-acyl-CoA binding molecular_function
GO:0008289 lipid binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-030131-2810 Predicted to enable fatty-acyl-CoA binding activity and lipid binding activity. Predicted to be located in cytoplasm. Orthologous to human ACBD6 (acyl-CoA binding domain containing 6).

Ensembl:

ensembl_id ENSDARG00000039456

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00069655 True 3161 mRNA 0.42 8 14381272 14441812

Neighbor

gene id symbol gene type direction distance location
XLOC_035509 NA coding upstream 134919 14241585 ~ 14246353 (+)
XLOC_035508 tpk2 coding upstream 210696 14158021 ~ 14170576 (+)
XLOC_035507 ugt5e1 coding upstream 321028 14058646 ~ 14060244 (+)
XLOC_035505 CT025854.1 coding upstream 361133 13971417 ~ 14020139 (+)
XLOC_035506 NA coding upstream 374465 14002077 ~ 14006807 (+)
XLOC_035512 NA coding downstream 116833 14558645 ~ 14561430 (+)
XLOC_035513 NA coding downstream 171174 14612986 ~ 14652650 (+)
XLOC_035514 cacna1ea coding downstream 268730 14710542 ~ 14828450 (+)
XLOC_035515 CR450798.1 coding downstream 364362 14806174 ~ 14806290 (+)
XLOC_035516 si:dkey-21p1.3 coding downstream 413659 14855471 ~ 14883692 (+)
XLOC_035503 NA non-coding upstream 581903 13794981 ~ 13799369 (+)
XLOC_035502 NA non-coding upstream 620357 13756013 ~ 13760915 (+)
XLOC_035525 BX510319.1 non-coding downstream 1034813 15476625 ~ 15479807 (+)
XLOC_035527 NA non-coding downstream 1817774 16259586 ~ 16265811 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000010_05921406_05962819 NA coding CI01000010 null 5921124 ~ 5962819 (-)