XLOC_035861 (CT025739.1)


Basic Information

Item Value
gene id XLOC_035861
gene name CT025739.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007119.7
NCBI id CM002892.2
chromosome length 54304671
location 37620554 ~ 37620670 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00070313
TTTGTCTACAATACAAATGTTGTTACGCAGATTTGGTCGCCcagtgaagctaagcagggcgTTGCCGGTttgtatctggatgggagaccacatgggaaagctaggttgttgccggaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000107174

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00070313 True 117 rRNA 0.49 1 37620554 37620670

Neighbor

gene id symbol gene type direction distance location
XLOC_035860 or135-1 coding upstream 89333 37527575 ~ 37531221 (+)
XLOC_035859 CR450833.3 coding upstream 104800 37514822 ~ 37515754 (+)
XLOC_035858 fmodb coding upstream 124768 37489495 ~ 37495786 (+)
XLOC_035857 mapkapk2b coding upstream 142709 37465380 ~ 37477845 (+)
XLOC_035856 CR450833.2 coding upstream 237323 37383101 ~ 37383231 (+)
XLOC_035862 adrb3a coding downstream 79420 37700090 ~ 37738751 (+)
XLOC_035863 npm2a coding downstream 128593 37749263 ~ 37754910 (+)
XLOC_035864 got1l1 coding downstream 134429 37755099 ~ 37772150 (+)
XLOC_035865 NA coding downstream 161362 37782032 ~ 37784041 (+)
XLOC_035866 prlhr2a coding downstream 284996 37905666 ~ 37950194 (+)
XLOC_035855 NA non-coding upstream 247756 37370464 ~ 37372798 (+)
XLOC_035853 CR550308.1 non-coding upstream 494314 37126124 ~ 37126240 (+)
XLOC_035846 CU694380.1 non-coding upstream 1090506 36529691 ~ 36530048 (+)
XLOC_035868 BX571947.1 non-coding downstream 809893 38430563 ~ 38430679 (+)
XLOC_035870 NA non-coding downstream 999078 38619748 ~ 38620264 (+)
XLOC_035871 CR392001.1 non-coding downstream 1301647 38922317 ~ 38922926 (+)
XLOC_035872 CR392001.4 non-coding downstream 1371158 38991828 ~ 39002148 (+)

Expression


Co-expression Network