XLOC_035865


Basic Information

Item Value
gene id XLOC_035865
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007119.7
NCBI id CM002892.2
chromosome length 54304671
location 37782032 ~ 37784041 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00072246
tggtcacctgatgtcacaacctaaatctaacctaatattaatatctTATTTGTGTGCCTGCTAGGAGGTGAGCACCCAGTGGCCATATCTGACGACACAATCCAATCATTGCAATGCTGGGTCTGAAAGGCTCCATTTTTGCAAATTCCTGCTTCACAGTGAGGAAATAATATTTCTCTTTGAGACAGAGAATGGTTGTTGTGCAATGTGGCAAGTTCCTGGGTATCAGTGTACATGTTAGGTAAAGAGAAAAATAAGTCTACAAGAAGTGAATCTGGGTAGTTTGAAACAGCAACAAggacagcaaacacacacgcctCAGTAAATTCTTGTCAGTGGTCTGCATCTCTGTCTTTCAGAgtataaagaattttttttttttttgacagattccTTTTCTCTGAGTTCCAGTACTAGGACCTTCATGGTGTTAAAAGAATAGCTTCTAACACTGTTGAGATTAGCTAGTGGAAGATCCCTGTGATAATCTCTTTATCTAGCAAAAGTGTACCACTATacaaaacttatttagagattTGGTGTAGTGTAGACTATGTATGTAGTTTATGATGTTCTAATTTACATTAGATGTTAAAGTAGCTAATGCCAATTTGATATTTTAGAATAAGCCTTGAGTTTATAGGTTcaagtttatatttaaaaaatataatgagTAACTTCACAACCACCAACTTCCATTATTCAATCATATGTACTTCATTCATGTCTGTCTTCTGTTAGTATACAGAAGAGGCTCTACAAATTAATATCTCACAAATCCTTCAGATAATTAAGTATACTTTAGGCTCCTTCAAATTTGATTATTTCTTATTCATTAAGTAAGATTCAATTGTTATCGTCTGTTGTGCTTAAAATCCATAGCCGGTGACCTGTTTTAAAAGAAGGAACAGATGATCTGACTCTCACACTCACTGATTTTAAGTAAAAGGTAATCAGAATCATTTGACGTCTCCACATGGACAATAAAACATCGTATATTTACAAACAGATATTTCCCTACATAAAATACTGGAAAGCCCTCCATTGTTTTTCAGTGTGTCTGCAGGCAAGTTCTCCATCATGTCCGATGTCATCTGAAATGTCTTGGTGTGACTGAGATACAGTGCGTACTAGTGGGTCCCCTTAGCTGGGACATTCCATTCAAATGACCCATAGGACACAAATTCTTCAGATCTAGCATTCCACCTGCAAATTATCAttgttatttcaaatacctcTACCTGTCTTGATCTGAGTGTTTAAGGAAAAGTCAAGAGGCTCAGAATTATTTTGTTGCCTGGTTACCTGCATCTCTTGCAAGAGATTTATCTTTTTCTTAAGATTTATCTTTGAGAATCTTATGCCTTGTATTGGTTATCTTCAAACTGACTTTGTAATTGacataatacatttactaatgagGGACTTTTTTCAGATTATTTAAATTGATCTTGCATTATTAACTCTACTAGATTATGTTAAATATGTTACACCTCAAGCCTCTGCTCAAGTTAATAATTTTACAGACTAAAATGAAGTAGCTGGAGCAGATAGGTACATCAACATCATAGACTTCAAGCTAACATAGAACAATAATATAtttcaattcaaataaatcattgcaaacaaacatacacaaactacaacatttcaacaaaaatttatattgttttttgtttttgttaatattttcctgtttattaaaattgtatttaacttTTTCCCCAACATACTGTATTAATGTGGGAGTACTATTTTTTTGGACTATGAtctttagttaattttttttgttaaattagttccattttttgtttttcattgatGCAAAAAAACTATTGTATgtgtacaaaatatatatatttaaaagtgaGATATAGCAATATAGAGTGCAACGTATTCATAGAGTTTCACTTTTTCCGCATTTCTTTATGTTAcacccttattccaaaatggattaaatccatttatttccttgcaaatttaataaaaataaaaaaacctgaaaaatca

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00072246 True 2010 lncRNA 0.32 1 37782032 37784041

Neighbor

gene id symbol gene type direction distance location
XLOC_035864 got1l1 coding upstream 9882 37755099 ~ 37772150 (+)
XLOC_035863 npm2a coding upstream 27122 37749263 ~ 37754910 (+)
XLOC_035862 adrb3a coding upstream 43281 37700090 ~ 37738751 (+)
XLOC_035861 CT025739.1 coding upstream 161362 37620554 ~ 37620670 (+)
XLOC_035860 or135-1 coding upstream 250811 37527575 ~ 37531221 (+)
XLOC_035866 prlhr2a coding downstream 121625 37905666 ~ 37950194 (+)
XLOC_035867 nkx6.3 coding downstream 631333 38415374 ~ 38419647 (+)
XLOC_035868 BX571947.1 coding downstream 646522 38430563 ~ 38430679 (+)
XLOC_035869 rfk coding downstream 780901 38564942 ~ 38573105 (+)
XLOC_035870 NA coding downstream 835707 38619748 ~ 38620264 (+)
XLOC_035859 CR450833.3 non-coding upstream 266278 37514822 ~ 37515754 (+)
XLOC_035856 CR450833.2 non-coding upstream 398801 37383101 ~ 37383231 (+)
XLOC_035855 NA non-coding upstream 409234 37370464 ~ 37372798 (+)
XLOC_035853 CR550308.1 non-coding upstream 655792 37126124 ~ 37126240 (+)
XLOC_035871 CR392001.1 non-coding downstream 1138276 38922317 ~ 38922926 (+)
XLOC_035872 CR392001.4 non-coding downstream 1207787 38991828 ~ 39002148 (+)
XLOC_035873 NA non-coding downstream 1272847 39056888 ~ 39058948 (+)

Expression


Co-expression Network