Gene
RNA
| Item | Value |
|---|---|
| gene id | G1681835 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048584.1 |
| NCBI id | CM023238.2 |
| chromosome length | 46616863 |
| location | 28828681 ~ 28828880 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1923832 | True | 200 | lncRNA | 0.45 | 1 | 28828681 | 28828880 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| camkmt | camkmt | coding | upstream | 83100 | 28548493 ~ 28745581 (+) |
| slc3a1 | slc3a1 | coding | upstream | 294093 | 28525469 ~ 28534588 (+) |
| ppm1ba | ppm1b | coding | upstream | 303588 | 28478800 ~ 28525093 (+) |
| abcg8 | abcg8 | coding | upstream | 496863 | 28316489 ~ 28331818 (+) |
| cep170aa | cep170 | coding | upstream | 534993 | 28225910 ~ 28293688 (+) |
| six3a | six3 | coding | downstream | 20171 | 28849051 ~ 28852328 (+) |
| LOC110499307 | NA | coding | downstream | 63298 | 28892178 ~ 28936652 (+) |
| LOC110499309 | prkce | coding | downstream | 298859 | 29127739 ~ 29280630 (+) |
| LOC110499310 | epas1 | coding | downstream | 457005 | 29285885 ~ 29356101 (+) |
| trnaa-ugc-146 | NA | coding | downstream | 561440 | 29390320 ~ 29390393 (+) |
| G1681820 | NA | non-coding | upstream | 19675 | 28808747 ~ 28809006 (+) |
| G1681797 | NA | non-coding | upstream | 44190 | 28784274 ~ 28784491 (+) |
| G1681791 | NA | non-coding | upstream | 51081 | 28777371 ~ 28777600 (+) |
| G1681162 | NA | non-coding | upstream | 99254 | 28688692 ~ 28729427 (+) |
| G1681137 | NA | non-coding | upstream | 190679 | 28637616 ~ 28638002 (+) |
| G1681846 | NA | non-coding | downstream | 6037 | 28834917 ~ 28835235 (+) |
| G1681870 | NA | non-coding | downstream | 26681 | 28855561 ~ 28855833 (+) |
| G1681897 | NA | non-coding | downstream | 46945 | 28875825 ~ 28876052 (+) |
| G1681914 | NA | non-coding | downstream | 55792 | 28884672 ~ 28884968 (+) |
| G1682002 | NA | non-coding | downstream | 122390 | 28951270 ~ 28951508 (+) |
| G1681792 | NA | other | upstream | 50272 | 28778006 ~ 28778409 (+) |
| G1681180 | NA | other | upstream | 102186 | 28717361 ~ 28726495 (+) |
| G1680230 | NA | other | upstream | 1452862 | 27375354 ~ 27375819 (+) |
| G1679823 | NA | other | upstream | 1741218 | 27084426 ~ 27087463 (+) |
| G1679135 | NA | other | upstream | 2053001 | 26700392 ~ 26775680 (+) |
| lhcgr | lhr | other | downstream | 628348 | 29437357 ~ 29458499 (+) |
| LOC110499316 | LOC106589729 | other | downstream | 743555 | 29572397 ~ 29588171 (+) |
| G1686317 | LOC106589755 | other | downstream | 3825474 | 32654354 ~ 32661648 (+) |
| LOC118942060 | LOC106589768 | other | downstream | 4348413 | 33177293 ~ 33196167 (+) |
| G1687675 | NA | other | downstream | 5496957 | 34325837 ~ 34326254 (+) |
