Gene
RNA
| Item | Value |
|---|---|
| gene id | G1681897 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048584.1 |
| NCBI id | CM023238.2 |
| chromosome length | 46616863 |
| location | 28875825 ~ 28876052 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1923895 | True | 228 | lncRNA | 0.37 | 1 | 28875825 | 28876052 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| six3a | six3 | coding | upstream | 23497 | 28849051 ~ 28852328 (+) |
| camkmt | camkmt | coding | upstream | 130244 | 28548493 ~ 28745581 (+) |
| slc3a1 | slc3a1 | coding | upstream | 341237 | 28525469 ~ 28534588 (+) |
| ppm1ba | ppm1b | coding | upstream | 350732 | 28478800 ~ 28525093 (+) |
| abcg8 | abcg8 | coding | upstream | 544007 | 28316489 ~ 28331818 (+) |
| LOC110499307 | NA | coding | downstream | 16126 | 28892178 ~ 28936652 (+) |
| LOC110499309 | prkce | coding | downstream | 251687 | 29127739 ~ 29280630 (+) |
| LOC110499310 | epas1 | coding | downstream | 409833 | 29285885 ~ 29356101 (+) |
| trnaa-ugc-146 | NA | coding | downstream | 514268 | 29390320 ~ 29390393 (+) |
| ankrd1a | LOC106589708 | coding | downstream | 547642 | 29423694 ~ 29428859 (+) |
| G1681870 | NA | non-coding | upstream | 19992 | 28855561 ~ 28855833 (+) |
| G1681846 | NA | non-coding | upstream | 40590 | 28834917 ~ 28835235 (+) |
| G1681835 | NA | non-coding | upstream | 46945 | 28828681 ~ 28828880 (+) |
| G1681820 | NA | non-coding | upstream | 66819 | 28808747 ~ 28809006 (+) |
| G1681797 | NA | non-coding | upstream | 91334 | 28784274 ~ 28784491 (+) |
| G1681914 | NA | non-coding | downstream | 8620 | 28884672 ~ 28884968 (+) |
| G1682002 | NA | non-coding | downstream | 75218 | 28951270 ~ 28951508 (+) |
| G1682005 | NA | non-coding | downstream | 77279 | 28953331 ~ 28953537 (+) |
| G1682008 | NA | non-coding | downstream | 80475 | 28956527 ~ 28956746 (+) |
| G1682067 | srbd1 | non-coding | downstream | 166097 | 29042149 ~ 29043742 (+) |
| G1681792 | NA | other | upstream | 97416 | 28778006 ~ 28778409 (+) |
| G1681180 | NA | other | upstream | 149330 | 28717361 ~ 28726495 (+) |
| G1680230 | NA | other | upstream | 1500006 | 27375354 ~ 27375819 (+) |
| G1679823 | NA | other | upstream | 1788362 | 27084426 ~ 27087463 (+) |
| G1679135 | NA | other | upstream | 2100145 | 26700392 ~ 26775680 (+) |
| lhcgr | lhr | other | downstream | 581176 | 29437357 ~ 29458499 (+) |
| LOC110499316 | LOC106589729 | other | downstream | 696383 | 29572397 ~ 29588171 (+) |
| G1686317 | LOC106589755 | other | downstream | 3778302 | 32654354 ~ 32661648 (+) |
| LOC118942060 | LOC106589768 | other | downstream | 4301241 | 33177293 ~ 33196167 (+) |
| G1687675 | NA | other | downstream | 5449785 | 34325837 ~ 34326254 (+) |
