G1687142


Basic Information

Item Value
gene id G1687142
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 33625941 ~ 33626164 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1929789
taatatggacttgttcttttaGCAAATAGGGCTTTTTTTTGTATACCATCctaaccttgtcacaacacaactgattagctcaaatgcattaagaaggaatgtaattccactgatttacttttaacaaggcaaacctgttaattgaaatgcattccaggtgactacctcatgaagctggttgagagaatgcgaagagtgtgcaaagctgtcataaagtcaaaggg

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1929789 True 224 lncRNA 0.37 1 33625941 33626164

Neighbor

gene id symbol gene type direction distance location
LOC118942063 NA coding upstream 96462 33528620 ~ 33530380 (+)
LOC110499354 NA coding upstream 108498 33474940 ~ 33517443 (+)
LOC110499352 LOC106589767 coding upstream 363807 33216272 ~ 33262134 (+)
LOC118942060 LOC106589768 coding upstream 429774 33177293 ~ 33196167 (+)
LOC110499532 hpse2 coding upstream 493116 33063035 ~ 33132825 (+)
LOC110499362 LOC106589783 coding downstream 35157 33661321 ~ 33787514 (+)
rab23 LOC106589799 coding downstream 323588 33949752 ~ 33958728 (+)
LOC110499368 LOC106589788 coding downstream 358302 33984466 ~ 34178931 (+)
zmp:0000000760 LOC106589800 coding downstream 557916 34184080 ~ 34208986 (+)
col21a1 LOC106589801 coding downstream 599707 34225871 ~ 34271548 (+)
G1687114 NA non-coding upstream 20286 33605238 ~ 33605655 (+)
G1686753 LOC106589781 non-coding upstream 66922 33533679 ~ 33559019 (+)
G1686760 LOC106589782 non-coding upstream 119884 33491588 ~ 33506057 (+)
G1686759 NA non-coding upstream 123532 33488179 ~ 33502409 (+)
G1687156 NA non-coding downstream 10974 33637138 ~ 33637356 (+)
G1687188 NA non-coding downstream 33238 33659402 ~ 33659854 (+)
G1687212 NA non-coding downstream 63271 33689435 ~ 33689903 (+)
G1687439 NA non-coding downstream 228474 33854638 ~ 33854910 (+)
G1687456 NA non-coding downstream 236972 33863136 ~ 33863392 (+)
G1686317 LOC106589755 other upstream 964293 32654354 ~ 32661648 (+)
LOC110499316 LOC106589729 other upstream 4049383 29572397 ~ 29588171 (+)
lhcgr lhr other upstream 4168020 29437357 ~ 29458499 (+)
G1681792 NA other upstream 4847532 28778006 ~ 28778409 (+)
G1687675 NA other downstream 699673 34325837 ~ 34326254 (+)
LOC110499396 LOC106589821 other downstream 1755545 35381609 ~ 35384567 (+)
G1689347 NA other downstream 2055203 35681367 ~ 35682437 (+)
LOC118942012 LOC106589797 other downstream 2075056 35701200 ~ 35702156 (+)
G1689671 NA other downstream 2255414 35881578 ~ 35881874 (+)

Expression


Co-expression Network