Gene
RNA
| Item | Value |
|---|---|
| gene id | G1686753 |
| gene name | LOC106589781 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048584.1 |
| NCBI id | CM023238.2 |
| chromosome length | 46616863 |
| location | 33533679 ~ 33559019 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| exportin-5-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1929311 | False | 515 | lncRNA | 0.46 | 2 | 33533679 | 33559019 |
| TU1929310 | True | 221 | lncRNA | 0.56 | 2 | 33558507 | 33559019 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118942063 | NA | coding | upstream | 4200 | 33528620 ~ 33530380 (+) |
| LOC110499354 | NA | coding | upstream | 16236 | 33474940 ~ 33517443 (+) |
| LOC110499352 | LOC106589767 | coding | upstream | 271545 | 33216272 ~ 33262134 (+) |
| LOC118942060 | LOC106589768 | coding | upstream | 337512 | 33177293 ~ 33196167 (+) |
| LOC110499532 | hpse2 | coding | upstream | 400854 | 33063035 ~ 33132825 (+) |
| LOC110499362 | LOC106589783 | coding | downstream | 102302 | 33661321 ~ 33787514 (+) |
| rab23 | LOC106589799 | coding | downstream | 390733 | 33949752 ~ 33958728 (+) |
| LOC110499368 | LOC106589788 | coding | downstream | 425447 | 33984466 ~ 34178931 (+) |
| zmp:0000000760 | LOC106589800 | coding | downstream | 625061 | 34184080 ~ 34208986 (+) |
| col21a1 | LOC106589801 | coding | downstream | 666852 | 34225871 ~ 34271548 (+) |
| G1686760 | LOC106589782 | non-coding | upstream | 27622 | 33491588 ~ 33506057 (+) |
| G1686759 | NA | non-coding | upstream | 31270 | 33488179 ~ 33502409 (+) |
| G1686758 | NA | non-coding | upstream | 56532 | 33476617 ~ 33477147 (+) |
| G1686748 | NA | non-coding | upstream | 72875 | 33460602 ~ 33460804 (+) |
| G1687114 | NA | non-coding | downstream | 46219 | 33605238 ~ 33605655 (+) |
| G1687142 | NA | non-coding | downstream | 66922 | 33625941 ~ 33626164 (+) |
| G1687156 | NA | non-coding | downstream | 78119 | 33637138 ~ 33637356 (+) |
| G1687188 | NA | non-coding | downstream | 100383 | 33659402 ~ 33659854 (+) |
| G1687212 | NA | non-coding | downstream | 130416 | 33689435 ~ 33689903 (+) |
| G1686317 | LOC106589755 | other | upstream | 872031 | 32654354 ~ 32661648 (+) |
| LOC110499316 | LOC106589729 | other | upstream | 3957121 | 29572397 ~ 29588171 (+) |
| lhcgr | lhr | other | upstream | 4075758 | 29437357 ~ 29458499 (+) |
| G1681792 | NA | other | upstream | 4755270 | 28778006 ~ 28778409 (+) |
| G1687675 | NA | other | downstream | 766818 | 34325837 ~ 34326254 (+) |
| LOC110499396 | LOC106589821 | other | downstream | 1822690 | 35381609 ~ 35384567 (+) |
| G1689347 | NA | other | downstream | 2122348 | 35681367 ~ 35682437 (+) |
| LOC118942012 | LOC106589797 | other | downstream | 2142201 | 35701200 ~ 35702156 (+) |
| G1689671 | NA | other | downstream | 2322559 | 35881578 ~ 35881874 (+) |
