G1686758


Basic Information

Item Value
gene id G1686758
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 33476617 ~ 33477147 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1929320
TTTGATGATCTCCTTCATCTTCTCCCAGACTCTGAACTTCAGGTTTCCCAGGTGTTTGGCCACGTCTATCAGCCCCCCTGACACCAGCTGTGGATCTGGCATTGTGCACTGGGCTCTGGAATAACATTCAGGAGTCAGAACGTATGTGGGGTTGGGTTCACAACCACAGAGAAGAGAGACGAGTAGCAGATCACTTACCTTACCTTCATGGTCTTGAAGTTCTGTAAAGTAGAGTATATAGTCATCAATATCATTGATTCATCAATACATCTTTGAGTTAATTTATAATGTATGTCTGAGAGAGAGCCGTCCTTACCTGCAGGAATGAGATGTCTTCATCTTTCAGCTCCTCCTCTATGGCTCTGATTGTGTCTGAAAGTGATGATATCTCTCTGTAGATCTGCTCAATCTTCTCCTTCATCTTCTGACTCTTCtgcttctcttcctctttcagaGCAGCTATCctggcctcctcttcctctcgtaGAAACTGGTGAAGTTTCTCAAACTCCTCCTTAATCTGCTTCTCTG

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1929320 True 531 lncRNA 0.44 1 33476617 33477147

Neighbor

gene id symbol gene type direction distance location
LOC110499352 LOC106589767 coding upstream 214483 33216272 ~ 33262134 (+)
LOC118942060 LOC106589768 coding upstream 280450 33177293 ~ 33196167 (+)
LOC110499532 hpse2 coding upstream 343792 33063035 ~ 33132825 (+)
LOC110499344 LOC106589763 coding upstream 613228 32849697 ~ 32863389 (+)
LOC110499341 LOC106589760 coding upstream 716570 32747591 ~ 32760047 (+)
LOC118942063 NA coding downstream 51651 33528620 ~ 33530380 (+)
LOC110499362 LOC106589783 coding downstream 184174 33661321 ~ 33787514 (+)
rab23 LOC106589799 coding downstream 472605 33949752 ~ 33958728 (+)
LOC110499368 LOC106589788 coding downstream 507319 33984466 ~ 34178931 (+)
zmp:0000000760 LOC106589800 coding downstream 706933 34184080 ~ 34208986 (+)
G1686748 NA non-coding upstream 15813 33460602 ~ 33460804 (+)
G1686745 NA non-coding upstream 21694 33454699 ~ 33454923 (+)
G1686730 NA non-coding upstream 21971 33425854 ~ 33454646 (+)
G1686724 NA non-coding upstream 69032 33407186 ~ 33407585 (+)
G1686713 NA non-coding upstream 104042 33372041 ~ 33372575 (+)
G1686759 NA non-coding downstream 11032 33488179 ~ 33502409 (+)
G1686760 LOC106589782 non-coding downstream 14441 33491588 ~ 33506057 (+)
G1686753 LOC106589781 non-coding downstream 56532 33533679 ~ 33559019 (+)
G1687114 NA non-coding downstream 128091 33605238 ~ 33605655 (+)
G1686317 LOC106589755 other upstream 814969 32654354 ~ 32661648 (+)
LOC110499316 LOC106589729 other upstream 3900059 29572397 ~ 29588171 (+)
lhcgr lhr other upstream 4018696 29437357 ~ 29458499 (+)
G1681792 NA other upstream 4698208 28778006 ~ 28778409 (+)
G1687675 NA other downstream 848690 34325837 ~ 34326254 (+)
LOC110499396 LOC106589821 other downstream 1904562 35381609 ~ 35384567 (+)
G1689347 NA other downstream 2204220 35681367 ~ 35682437 (+)
LOC118942012 LOC106589797 other downstream 2224073 35701200 ~ 35702156 (+)
G1689671 NA other downstream 2404431 35881578 ~ 35881874 (+)

Expression


Co-expression Network