G1686748


Basic Information

Item Value
gene id G1686748
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 33460602 ~ 33460804 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1929305
catacatactgtatacacacacatcaaatcaaattttatttgtcacatacacatggttagcagatgttaatgcgagtgtagcgaaatgcttgtgcttctagttccgacaatgcagtaataaccaacaagtaatctagctaacaattccaaaactactaccttatagacacaagtgtaaggggataaataatatgtacataaag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1929305 True 203 lncRNA 0.34 1 33460602 33460804

Neighbor

gene id symbol gene type direction distance location
LOC110499352 LOC106589767 coding upstream 198468 33216272 ~ 33262134 (+)
LOC118942060 LOC106589768 coding upstream 264435 33177293 ~ 33196167 (+)
LOC110499532 hpse2 coding upstream 327777 33063035 ~ 33132825 (+)
LOC110499344 LOC106589763 coding upstream 597213 32849697 ~ 32863389 (+)
LOC110499341 LOC106589760 coding upstream 700555 32747591 ~ 32760047 (+)
LOC110499354 NA coding downstream 14136 33474940 ~ 33517443 (+)
LOC118942063 NA coding downstream 67994 33528620 ~ 33530380 (+)
LOC110499362 LOC106589783 coding downstream 200517 33661321 ~ 33787514 (+)
rab23 LOC106589799 coding downstream 488948 33949752 ~ 33958728 (+)
LOC110499368 LOC106589788 coding downstream 523662 33984466 ~ 34178931 (+)
G1686745 NA non-coding upstream 5679 33454699 ~ 33454923 (+)
G1686730 NA non-coding upstream 5956 33425854 ~ 33454646 (+)
G1686724 NA non-coding upstream 53017 33407186 ~ 33407585 (+)
G1686713 NA non-coding upstream 88027 33372041 ~ 33372575 (+)
G1686711 NA non-coding upstream 91770 33368588 ~ 33368832 (+)
G1686758 NA non-coding downstream 15813 33476617 ~ 33477147 (+)
G1686759 NA non-coding downstream 27375 33488179 ~ 33502409 (+)
G1686760 LOC106589782 non-coding downstream 30784 33491588 ~ 33506057 (+)
G1686753 LOC106589781 non-coding downstream 72875 33533679 ~ 33559019 (+)
G1686317 LOC106589755 other upstream 798954 32654354 ~ 32661648 (+)
LOC110499316 LOC106589729 other upstream 3884044 29572397 ~ 29588171 (+)
lhcgr lhr other upstream 4002681 29437357 ~ 29458499 (+)
G1681792 NA other upstream 4682193 28778006 ~ 28778409 (+)
G1687675 NA other downstream 865033 34325837 ~ 34326254 (+)
LOC110499396 LOC106589821 other downstream 1920905 35381609 ~ 35384567 (+)
G1689347 NA other downstream 2220563 35681367 ~ 35682437 (+)
LOC118942012 LOC106589797 other downstream 2240416 35701200 ~ 35702156 (+)
G1689671 NA other downstream 2420774 35881578 ~ 35881874 (+)

Expression


Co-expression Network