G1687545 (bag2)


Basic Information

Item Value
gene id G1687545
gene name bag2
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 33967099 ~ 33970046 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1930212
taatctgaatAAGAATGCCATGTTTCAACATCAGTGACTTGcttaaaaaaatatctaaatatgTGTTAATGGACATATAAAATGACTGCCTAGTATCCTATTCTGTATGTGCATGTGCTTGTGTTGCGTACTCTGCACCTGCATGTGAAATGCCTATTCATGATGTATTGACATGGTACATTGTCTCTAATGAGGTCTCACAGATAGTACTGTTACTTTGGCTATTTCTGGACTGGTCGTTCAcaagtacatacagttgaagtcggaagtttacatacactttagccaaatacatttaaactcagtttttcacaattcctgacatttaatcctaggaaaaattccctgttttaggtcagttaggatcaccactttattttaagaatgtgtaatgtcagaataatagtaaagagaataatttatttcattacattcccagtgggtcagatgttcacatacactcaattagtatttggtagtattgcctttaaattgtttaacttgggtctaaCGTTTCAgttagccttccaaaagcttcccacaataagttgggtgaattttggcccattcctccagacagagctggtgtaactgaatcaggtttgtaggcctccttgctcgcacacactttttcagttctgcccacacatgttctataggattgaggtcagggctttgtaatggccactccaattccttgactttgttttcctgaaaccattttgccacaactttggaagtatgcttggggtcattgtccatttggaagatacatttgcgaccaagctttaacttccttactgatgtcttgagatgattcttcaatatatccacataataattcttcctcatgatgccatctactttgtgaagtgcaccagtccctcctgcagcaaagcacccccacaacatgatgcacccccgtgctttacggttgggatggtgttcttcggtttgcaagcctccccctttttcctccaagcataacgatggtcattatggccaaacagttctatttttgtttcatcagaccagaggacatttctccaaaaagtaccatccaTGTGgggttgcaaaccgtagtctggctttggtTATGGCGGTTTCCTCTATGAGgcagaactcgtctccttcctgtgcggtatgatggctgtgtggtcccatggtgtttatactcgtgtttgtacagatgaatgtggtaccttcaggagtttggaaattgctcccaaggatgaaccagacttgtgcaggtgtacaattttttttctgaggtcttgtctgattttttgattttcctatgatgtcaagaaaagaggcactgagtttgaaggtaggccttgaaatacatccacaggtacacctccaattgactcaaatgatgtcaattagcctatcagaagcttctaaagccatgacatcattttctggaattttccaagctgtttaaaggcacagtcaacttaatgtatgtaaacttctgacccactggaattgtaatacagtgaattataagtgaaataatctgtctgtaaacaatttttggaaaaatgacttgtcaagcacaaagtagatgtcctaactgacttgccaaaactatagtttgttaacaagaaatttgtggagtggttgaaagactagttttattgactccaacctaagtgtatgtaaacttttgacttcaactgtatgtacgtaACATATCTTTACATAAAGATATTAACTTAATTTAGCTGATTAACTGTCTCAGTACCTTGCCTTGTGTTTTCAGGTAGGTTGTGACCCGGGCTTACAGTAATGACCGGAGAGTAGCATAACATGTCAAGGATTAAGACTGTAAATGATCACATTAAGATGGTTCAACAAAAACAATGTCGATGCATTTTTTAAATGCCTTAATGAGTGGCAGCCTGAGTGCTTATTGAAACTACTACATAAGGCAGTGTGTAGGTAACTGAACTGACATTCAAAACAATAATGTGACAATGTTAGTAATGTTAAGATGTGTAAAACTTTTTTATATGCAATATTTATGGTGACAGGGTTTGAATGTGACATTAGTGGTAGTAGAATACAGTGGTAGTCATAAGGACTTATCAAATGTTCAAGGCAAAGCACTTTAAAGGTTCAAGTTATATAGAACAGACTATATTTATCCAGTCTAGGTAGACCTGTACTTTATCCAGTCTAGGTAGACCTGTACTTTATCCAGTCTAGGTAGACCTGTACTTTATCCAGTCTAGGTAGACCTGTACTTTAGTATGGACGCCTTGTGCCATGACAGGAAGACGGGTGGATGCTATCTTTCACTAATTATGGGAAATAATAGCATGGTAATGAGGAGTTTGGTCTCCCAATATATTATGACTTTCTATTAGTTAGGGCTATTAGGGGGGTTGAATCAGTATGAGTGCCTTCATTTGCCATTGGCACTGTTTAAGTCATCCACTTTCTGATGATCCATTATCTTGATATTCTTCTCAGCATTATCCACGTTCCTTATCAGAGTTTCCAGCCTCCTCTTGATTTTTTTCTGATCTTCCAGGGCGCAGGTGATGACGATCGTCTGGAATTTTGTATCGATAGGAACCGGTGGTGCCTCGGTCACACAGGCAGCGTGCAGTGCCATCAGGCCCTTTCTGGCCCCATCCATGTCATCAAGCAACTTTGCAGCAAGCTCATCAATCAAAGAGGTAGCCTTGCGTAGGGCATCCTCTTGTGTGGAGTTTCTAATGATTTCCACTGATATTTCAACTGTCAGCGTCCTACCCAGAAGACGGTTAGCAGTTAAAGat
>TU1930210
AAAACTTTTTTATATGCAATATTTATGGTGACAGGGTTTGAATGTGACATTAGTGGTAGTAGAATACAGTGGTAGTCATAAGGACTTATCAAATGTTCAAGGCAAAGCACTTTAAAGGTTCAAGTTATATAGAACAGACTATATTTATCCAGTCTAGGTAGACCTGTACTTTATCCAGTCTAGGTAGACCTGTACTTTATCCAGTCTAGGTAGACCTGTACTTTATCCAGTCTAGGTAGACCTGTACTTTATCCAGTCTAGGTAGACCTGTACTTTAGTATGGACGCCTTGTGCCATGACAGGAAGACGGGTGGATGCTATCTTTCACTAATTATGGGAAATAATAGCATGGTAATGAGGAGTTTGGTCTCCCAATATATTATGACTTTCTATTAGTTAGGGCTATTAGGGGGGTTGAATCAGTATGAGTGCCTTCATTTGCCATTGGCACTGTTTAAGTCATCCACTTTCTGATGATCCATTATCTTGATATTCTTCTCAGCATTATCCACGTTCCTTATCAGAGTTTCCAGCCTCCTCTTGATTTTTTTCTGATCTTCCAGGGCGCAGGTGATGACGATCGTCTGGAATTTTGTATCGATAGGAACCGGTGGTGCCTCGGTCACACAGGCAGCGTGCAGTGCCATCAGGCCCTTTCTGGCCCCATCCATGTCATCAAGCAACTTTGCAGCAAGCTCATCAATCAAAGAGGTAGCCTTGCGTAGGGCATCCTCTTGTGTGGAGTTTCTAATGATTTCCACTGATATTTCAACTGTCAGCGTCCTACCCAGAAGACGGTTAGCAGTTAAAGat
>TU1930211
AAAACTTTTTTATATGCAATATTTATGGTGACAGGGTTTGAATGTGACATTAGTGGTAGTAGAATACAGTGGTAGTCATAAGGACTTATCAAATGTTCAAGGCAAAGCACTTTAAAGGTTCAAGTTATATAGAACAGACTATATTTATCCAGTCTAGGTAGACCTGTACTTTATCCAGTCTAGGTAGACCTGTACTTTATCCAGTCTAGGTAGACCTGTACTTTATCCAGTCTAGGTAGACCTGTACTTTATCCAGTCTAGGTAGACCTGTACTTTATCCAGTCTAGGTAGACCTGTACTTTAGTATGGACGCCTTGTGCCATGACAGGAAGACGGGTGGATGCTATCTTTCACTAATTATGGGAAATAATAGCATGGTAATGAGGAGTTTGGTCTCCCAATATATTATGACTTTCTATTAGTTAGGGCTATTAGGGGGGTTGAATCAGTATGAGTGCCTTCATTTGCCATTGGCACTGTTTAAGTCATCCACTTTCTGATGATCCATTATCTTGATATTCTTCTCAGCATTATCCACGTTCCTTATCAGAGTTTCCAGCCTCCTCTTGATTTTTTTCTGATCTTCCAGGGCGCAGGTGATGACGATCGTCTGGAATTTTGTATCGATAGGAACCGGTGGTGCCTCGGTCACACAGGCAGCGTGCAGTGCCATCAGGCCCTTTCTGGCCCCATCCATGTCATCAAGCAACTTTGCAGCAAGCTCATCAATCAAAGAGGTAGCCTTGCGTAGGGCATCCTCTTGTGTGGAGTTTCTAATGATTTCCACTGATATTTCAACTGTCAGCGTCCTACCCAGAAGACGGTTAGCAGTTAAAGat

Function

symbol description
bag2 Predicted to enable adenyl-nucleotide exchange factor activity. Predicted to be involved in protein stabilization. Is expressed in heart rudiment; heart tube; myotome; and primitive heart tube. Orthologous to human BAG2 (BAG cochaperone 2).

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1930212 False 2792 lncRNA 0.40 2 33967099 33970046
TU1930210 False 813 lncRNA 0.42 2 33969104 33970046
TU1930211 True 839 lncRNA 0.42 2 33969104 33970046

Neighbor

gene id symbol gene type direction distance location
rab23 LOC106589799 coding upstream 8371 33949752 ~ 33958728 (+)
LOC110499362 LOC106589783 coding upstream 179585 33661321 ~ 33787514 (+)
LOC118942063 NA coding upstream 437620 33528620 ~ 33530380 (+)
LOC110499354 NA coding upstream 449656 33474940 ~ 33517443 (+)
LOC110499352 LOC106589767 coding upstream 704965 33216272 ~ 33262134 (+)
LOC110499368 LOC106589788 coding downstream 14420 33984466 ~ 34178931 (+)
zmp:0000000760 LOC106589800 coding downstream 214034 34184080 ~ 34208986 (+)
col21a1 LOC106589801 coding downstream 255825 34225871 ~ 34271548 (+)
bmp5 LOC106589803 coding downstream 303821 34273867 ~ 34312150 (+)
hmgcll1 LOC106589805 coding downstream 377108 34347154 ~ 34379366 (+)
G1687496 NA non-coding upstream 71128 33895734 ~ 33895971 (+)
G1687463 NA non-coding upstream 97858 33868817 ~ 33869241 (+)
G1687456 NA non-coding upstream 103707 33863136 ~ 33863392 (+)
G1687439 NA non-coding upstream 112189 33854638 ~ 33854910 (+)
G1687212 NA non-coding upstream 277196 33689435 ~ 33689903 (+)
G1687581 NA non-coding downstream 50414 34020460 ~ 34020756 (+)
G1687627 NA non-coding downstream 241487 34211533 ~ 34211909 (+)
G1687628 NA non-coding downstream 242337 34212383 ~ 34212610 (+)
G1687674 NA non-coding downstream 355321 34325367 ~ 34325584 (+)
G1687676 NA non-coding downstream 356290 34326336 ~ 34326687 (+)
LOC118942060 LOC106589768 other upstream 781823 33177293 ~ 33196167 (+)
G1686317 LOC106589755 other upstream 1305451 32654354 ~ 32661648 (+)
LOC110499316 LOC106589729 other upstream 4390541 29572397 ~ 29588171 (+)
lhcgr lhr other upstream 4509178 29437357 ~ 29458499 (+)
G1681792 NA other upstream 5188690 28778006 ~ 28778409 (+)
G1687675 NA other downstream 355791 34325837 ~ 34326254 (+)
LOC110499396 LOC106589821 other downstream 1411663 35381609 ~ 35384567 (+)
G1689347 NA other downstream 1711321 35681367 ~ 35682437 (+)
LOC118942012 LOC106589797 other downstream 1731174 35701200 ~ 35702156 (+)
G1689671 NA other downstream 1911532 35881578 ~ 35881874 (+)

Expression


Co-expression Network