G1687676


Basic Information

Item Value
gene id G1687676
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 34326336 ~ 34326687 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1930381
tgaccacacggggtgagatcttgcgtggagccccagatcgagggagattatcagtggtcttgtatgtcttccatttcctaataattgctcccatagttgatttcttcaaaccaagctgcttacctattgcagattcagtcttcccagcctggtgcaggtctacaattttgtttctggtgtcctttgtaagctctttggtcttggccatagtggagtttggagtgtgactgtttgaggttgtggacaggtgtcttttatactgataacaagttcaaacaggtgccattaatacaggtaacgagtggaggacagaggaacctcttaaagaagaagttacaggtctgtgagagcc

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1930381 True 352 lncRNA 0.45 1 34326336 34326687

Neighbor

gene id symbol gene type direction distance location
bmp5 LOC106589803 coding upstream 14186 34273867 ~ 34312150 (+)
col21a1 LOC106589801 coding upstream 54788 34225871 ~ 34271548 (+)
zmp:0000000760 LOC106589800 coding upstream 117350 34184080 ~ 34208986 (+)
LOC110499368 LOC106589788 coding upstream 147405 33984466 ~ 34178931 (+)
rab23 LOC106589799 coding upstream 367608 33949752 ~ 33958728 (+)
hmgcll1 LOC106589805 coding downstream 20467 34347154 ~ 34379366 (+)
LOC118942064 NA coding downstream 172344 34499031 ~ 34503666 (+)
klhl31 LOC106589810 coding downstream 242368 34569055 ~ 34573880 (+)
gclc gsh1 coding downstream 256629 34583316 ~ 34591320 (+)
elovl5 LOC100192340 coding downstream 268270 34594957 ~ 34606103 (+)
G1687674 NA non-coding upstream 752 34325367 ~ 34325584 (+)
G1687628 NA non-coding upstream 113726 34212383 ~ 34212610 (+)
G1687627 NA non-coding upstream 114427 34211533 ~ 34211909 (+)
G1687581 NA non-coding upstream 305580 34020460 ~ 34020756 (+)
G1687545 bag2 non-coding upstream 356290 33967099 ~ 33970046 (+)
G1687679 NA non-coding downstream 2255 34328942 ~ 34329146 (+)
G1687681 NA non-coding downstream 5132 34331819 ~ 34332148 (+)
G1687730 NA non-coding downstream 84131 34410818 ~ 34411022 (+)
G1687731 NA non-coding downstream 84503 34411190 ~ 34411410 (+)
G1687675 NA other upstream 82 34325837 ~ 34326254 (+)
LOC118942060 LOC106589768 other upstream 1141060 33177293 ~ 33196167 (+)
G1686317 LOC106589755 other upstream 1664688 32654354 ~ 32661648 (+)
LOC110499316 LOC106589729 other upstream 4749778 29572397 ~ 29588171 (+)
lhcgr lhr other upstream 4868415 29437357 ~ 29458499 (+)
LOC110499396 LOC106589821 other downstream 1055022 35381609 ~ 35384567 (+)
G1689347 NA other downstream 1354680 35681367 ~ 35682437 (+)
LOC118942012 LOC106589797 other downstream 1374533 35701200 ~ 35702156 (+)
G1689671 NA other downstream 1554891 35881578 ~ 35881874 (+)
G1689732 LOC106612293 other downstream 1793929 36120616 ~ 36125390 (+)

Expression


Co-expression Network