G1690091 (LOC106589857)


Basic Information

Item Value
gene id G1690091
gene name LOC106589857
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 36261774 ~ 36263131 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1933086
gtgtgtgtgtgtgtgtctgcctgcacgtgtgtgtgtgtctgcctgcacgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtatgtgtgtgtgtctgtcttaccCGTCAGTGCAGTCATCCTGAGACGCTTTTCTCTCTACAACTTTCAGCGCTGCCTCCAGTGATGTGTTGGTCTCAACCAGCCTCTTCTGAACCAACACCTCCGAGCAGGCCTCACCAGCCTGGGCCTTTCCTGCTCTCCCTGCCTGGCCTGGAGGCACCAAGGTGCGGTAGGATGGAGCGCGGGTTGCCTGGGCTGTAGGGGCTGAGGTTATGGATGAGCTGAGCTGGGGAAGTGTAGAGGCAGAGACAGTAGCAGGCATCTGATTCGTTGGCCTGGATGTTACTGTTCTCTGCTGAATGCCTGCTTTGGTTGCTGTTACTGGTTTCTGTGAATTGCCTGGTATACaggtggttgtgtgtgtattttgACTGGCTGTTATATGGTTCTGTGTGCTGCCTGTCACGGTCTTCTGTTGACTGGCTGGTATAGGGGTGAGGATAGGTTTGAGGACAGGGCTGGTTGGTTTGGACGACAGGGGTGGTTTCTGGCCTTTCCCTGTCGATTCTGTTCTCTGTAAACAGCTCCCTGACTTCACACCTGCTTCCTCCTCTTGCTTGtctccgtttgtgtgtgtgtggaagccgTTGGaccggctgtgtgtgtgtggctgtgtgtgtccgTCGTCTTCGCTGGCGGTGAAGAtctcgtccagtgtgtgtgtgtcccggtCTTTGGGCTGACGCCGTCGTTTGACCGTGTCCGATTCTTTGAGGTTGAACTCAGGGACCCCCAAGGACTTTGAGGCCTGCATTTTTGGGTCTTCTGGAGAAGCCCGGGGTTGGATTTCAGAGTCTGACCGGAAGCCTGCTCCCATCCTGGGCCGTTGTTTGATGGTGAGGTTGCCCTCCTCCGCAAAAGGGAGGTTCTCATTGGAGCTACTCTGAGGTGATGTAGAGCTTTCCAATACTGAACCATCCTTCcgcactctctcctcctcttctgggcttttctttatccctccatctctatccctccgcTCGCCACCCATCCTCCTCAGGCCTCCCAGCCCCAGAGCGGGTACAGGTTTGTGGGAGGCGAGGGTGGGGGTGTGAGGGGAGGGTAACACTACCCCCTTAGAGGGGCTGCCCCCGGGCCTGGACCCCTGTAGCCTGGCTGCGATGCTTCTCACACTGCCTGCACTCTCTGtctccacccctcccacctccacCTGC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1933086 True 1276 lncRNA 0.57 2 36261774 36263131

Neighbor

gene id symbol gene type direction distance location
LOC110499432 LOC106589856 coding upstream 14262 36207378 ~ 36247512 (+)
mrpl27 LOC106589850 coding upstream 82173 36173188 ~ 36179601 (+)
LOC110499428 LOC106589848 coding upstream 90875 36161203 ~ 36170899 (+)
LOC110499426 LOC106589844 coding upstream 103992 36125503 ~ 36157782 (+)
LOC110499422 arl3 coding upstream 215697 36037722 ~ 36046077 (+)
LOC118942466 NA coding downstream 160615 36423746 ~ 36423861 (+)
LOC110499434 LOC106589860 coding downstream 174074 36437205 ~ 36540905 (+)
LOC110499435 LOC106589861 coding downstream 290748 36468873 ~ 36564830 (+)
LOC118942015 LOC106589862 coding downstream 315595 36578726 ~ 36592198 (+)
LOC110499541 ankfn1 coding downstream 432644 36695775 ~ 36809459 (+)
G1690089 NA non-coding upstream 6438 36254816 ~ 36255336 (+)
G1690088 NA non-coding upstream 11359 36250096 ~ 36250415 (+)
G1690078 NA non-coding upstream 13520 36247808 ~ 36248254 (+)
G1689849 NA non-coding upstream 65323 36196107 ~ 36196451 (+)
G1689845 NA non-coding upstream 73267 36188291 ~ 36188507 (+)
G1690092 NA non-coding downstream 1529 36264660 ~ 36264981 (+)
G1690093 NA non-coding downstream 2753 36265884 ~ 36266118 (+)
G1690094 NA non-coding downstream 3433 36266564 ~ 36266865 (+)
G1690095 NA non-coding downstream 4374 36267505 ~ 36267705 (+)
G1690098 NA non-coding downstream 11757 36274888 ~ 36275127 (+)
G1689732 LOC106612293 other upstream 136384 36120616 ~ 36125390 (+)
G1689671 NA other upstream 379900 35881578 ~ 35881874 (+)
LOC118942012 LOC106589797 other upstream 559635 35701200 ~ 35702156 (+)
G1689347 NA other upstream 579337 35681367 ~ 35682437 (+)
LOC110499396 LOC106589821 other upstream 877208 35381609 ~ 35384567 (+)
G1690099 NA other downstream 12351 36275482 ~ 36275943 (+)
G1690116 NA other downstream 41808 36304939 ~ 36312698 (+)
G1690753 NA other downstream 614920 36878051 ~ 36880738 (+)
G1691142 NA other downstream 1278789 37541920 ~ 37543265 (+)

Expression


Co-expression Network