G1690088


Basic Information

Item Value
gene id G1690088
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 36250096 ~ 36250415 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1933083
tcagggcttactgtaggttacagtagtacagctcggtttgtgttttttactatgtcagggcttactgtaggttacagtagtacAGCTCGGTTTGTGTTTTTCACTATGTCAGggcttactgtaggttacagtagtacAGCTCGGTTTGTGTTTTTCACTATGTCAGggcttactgtaggttacagtagtacAGCTCGGTTTATGTTTTTCACTATGTCAGggcttactgtaggttacagtagtacagctcggtttgtgttttttactatgtcagggcttactgtaggttacagtagtacagctcggtttgtgttttttac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1933083 True 320 lncRNA 0.42 1 36250096 36250415

Neighbor

gene id symbol gene type direction distance location
LOC110499432 LOC106589856 coding upstream 2584 36207378 ~ 36247512 (+)
mrpl27 LOC106589850 coding upstream 70495 36173188 ~ 36179601 (+)
LOC110499428 LOC106589848 coding upstream 79197 36161203 ~ 36170899 (+)
LOC110499426 LOC106589844 coding upstream 92314 36125503 ~ 36157782 (+)
LOC110499422 arl3 coding upstream 204019 36037722 ~ 36046077 (+)
LOC118942466 NA coding downstream 173331 36423746 ~ 36423861 (+)
LOC110499434 LOC106589860 coding downstream 186790 36437205 ~ 36540905 (+)
LOC110499435 LOC106589861 coding downstream 303464 36468873 ~ 36564830 (+)
LOC118942015 LOC106589862 coding downstream 328311 36578726 ~ 36592198 (+)
LOC110499541 ankfn1 coding downstream 445360 36695775 ~ 36809459 (+)
G1690078 NA non-coding upstream 1842 36247808 ~ 36248254 (+)
G1689849 NA non-coding upstream 53645 36196107 ~ 36196451 (+)
G1689845 NA non-coding upstream 61589 36188291 ~ 36188507 (+)
G1689843 NA non-coding upstream 64601 36185180 ~ 36185495 (+)
G1689835 NA non-coding upstream 89857 36159939 ~ 36160239 (+)
G1690089 NA non-coding downstream 4401 36254816 ~ 36255336 (+)
G1690091 LOC106589857 non-coding downstream 11359 36261774 ~ 36263131 (+)
G1690092 NA non-coding downstream 14245 36264660 ~ 36264981 (+)
G1690093 NA non-coding downstream 15469 36265884 ~ 36266118 (+)
G1690094 NA non-coding downstream 16149 36266564 ~ 36266865 (+)
G1689732 LOC106612293 other upstream 124706 36120616 ~ 36125390 (+)
G1689671 NA other upstream 368222 35881578 ~ 35881874 (+)
LOC118942012 LOC106589797 other upstream 547957 35701200 ~ 35702156 (+)
G1689347 NA other upstream 567659 35681367 ~ 35682437 (+)
LOC110499396 LOC106589821 other upstream 865530 35381609 ~ 35384567 (+)
G1690099 NA other downstream 25067 36275482 ~ 36275943 (+)
G1690116 NA other downstream 54524 36304939 ~ 36312698 (+)
G1690753 NA other downstream 627636 36878051 ~ 36880738 (+)
G1691142 NA other downstream 1291505 37541920 ~ 37543265 (+)

Expression


Co-expression Network