LOC110500891 (afap1)


Basic Information

Item Value
gene id LOC110500891
gene name afap1
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 54349344 ~ 54508277 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036958234.1
AATCGGCGTCTGTCCCATCACACACCGAAAGGAAGCAAGGAGCGCTTGGAGGAGAGGCGCGGACGTGCTTTTCTATTGTCACGGGGAAGAACACAGGAGAAGTACACACCCATGAGTTATCTCCGCGACATGGACAAAAACGGGAAAGCCATGGAGGAGTTGGTGTGTGAGCTTCGTCTGTTCCTGGACCTGCTGGACAGGGAATATCTGAGCGCTGGGGTCAGGGAGAAGAAGATGCTCATCTCCAACATCCTTCACAGGGTCCTCACCGCTAAAGaGCCCTCGTTCAAGTCAGAGGACCACAGCAGCCTTTCTGCACCCCCTCAGATGCCACTCCCTGAGATCCCACACCCCTGGCTCCCTCCAGACAACgggcctcctcctctccccagctgCTCTCTCCCAGAGGGATACTATGAAGAGGCCGTCCCCCTCAGTCCTGGAAAAGCCCCAGAATACATCACTTCCAACTATGATTCTGACCAGATGAGCAGTTCGTATGAGTCGtatgacgaggaggaggaggatgggaagGGAAACAGAGGGAAGAAGATGCGACACCAGTGGCCTAGCGAGGAGGCCTCCATGGGTCTGGTCAAGGACGCACGCATCTGTGCCTTCCTGCTGCGCAAGAAACGCTTCGGCCAGTGGACCAAGCTGCTCTgtgtcatcaaggacaacaagcTGCTGtgCTACAAGTCATCTAAAGACCAGACACCCCAGATGGAGCTGCTGTTATCAGGCTGTAGCATCACACATGTCCCCAAGGACGGCAAGAAGAAGAAACACGAGCTGAAGATAGTCCACCAGGGGGCAGATGCCCTGGTCCTGGCCGTGCAGAGCAAAGAGCAGGCTGAGGAGTGGCTCAAGGTGATGAGGGAGGTGTGCAGTAATGGCTGTGACTCAGATGTAGCAGGGTCTCCTGTGCACAAGCCCGACCTGGAGAAGAAGGTGTTGTGTGATAGGCCGAGCTCAGACGGAGAGCCGCCCAATGAGAACGGACACACCGTCACCGACTGTAAGGACCAAGgtaAAGGGAAGAAGGACTCTCAGAAGAGTCAGAAGGGAGGCACTCTGAGTAAAGGGGCGGGGAAGAAGATCACTAAGATCATTGGCTTAGGCAAGAAGAAGCCGTCCACTGACGAACAGACCTCTTCAGCCGAGGAGGACATACCCACCTGTGGCTACCTGAACGTGCTGTCCAATAACCGCTGGCGTGAGCGTTGGTGTCGTCTGAAGGACAACCAGCTGCTGCTTCATAAGGACCGTACTGATCTGAAGACCCACACGGCCAGCCTGCCCCTCAGAGGCTGCGAGGTCAGCCCCGGACTGGACTCCAAACACCCCTTCGCCTTCCGCCTTCTCCGCAACGGACAGGAGGTGGCTGTACTGGAGGCGTCCTCCTCAGAGGTCATGGGTCGGTGGCTAGGGATGCTGCTAGCTGAAACAGGCTCTATCACAGACCCTGCTGCCTTACATTACGATTACATAGATGTAGAGACTACCGCAAACGTTATCCAGCTGGCCAAGCAGTCCttctgCTTCACTAGTAAACGTGCTGTATCTCCCAACCCTTATCTGGACAACCCTGCCAACAGTTACGCATGTCCCTCTGGAATGGCACTGCACTATGATGATGTGCCCATCAATGGaacgGACCCTGAGGCGCTGTACTCCAGCCCTGCCACCGGAGGGCGACGTCTGAGAGAGGAGGTGTTGTATGAGAACACTGACCCCGACCTGTATGAGAACATGCCTTCGCCCAAGCTGGCTGCCCGCTACTCCCCCAAGCCCAGTCGTCTggcatcatcctcctcctcctcctcttcctccagccaCTACAAAACCCCTGGCCCTGTCAAATCcaaactcctctcctcttcctccgctTCCTCggctaacactaacactaaagCCGTTGCTCAGCTGAAGGGAAAAAAGGTCCCAGTGACCAATGGGACAGCGTCTAAACAGAAGGTGGACAAGAACCAGGCCAAGAAGACCAATGGAACAACCAATGGAACAGCATCTGTGAAACGCAACAACtccagtgCAGAGCAGTATAAGTACGGTAAGAACCGTGTGGAGGCGGACGCCAAGATGCTGCAGGCTAAAGAGGAGGAGCTAATCAACAGAAAGCAGGACATCAGGAACCGTCTGACCCAGCTGAAGAAGGACAGGAAAGACCTGCGCACCGCCATGGAGGCCAGCACcgCTAAGCGCTCCGCTGGGTCCCTGGCGGAGCGGCTGAAAAAGGTGGAGGACGAGTGCAAGCTGAAGGAGGACGAGCGGGTGAGCCTGGAGCTGGAGATGACAGAGGTCAAGGAGAGTCTGAAGAAGGCCCTGAACGGAGGAGTCACTCTGGGACTCACCATCGAGCCCAAGTCTGGCACCTCCAGCCCACAGTCCCCAGTGTTGCTGAGGCGTACCCTAGAGAACTCTCCCATCTCCAGCTGTGACACCAGCGACACAGAGAGCTGTTCTACTCTGCCCGTCAACAGTGCCTCCCTCCTCCGCAGAACGACCAATCAGAAACCCTCGGCCGTCCGCGGCCATGTCCTCAAGAAGGCAAAGGAATGGGAGATGAAGACTGGCACATGAGCAacaactctgttcacaacagtcCTATCTTATTAGctttctattttattttaatgcgtgtatatatttatttaaatcaGTTCGTATGGGGAGGAAGGTTGAAGAGGAGTACACTACAAGCATAGCCAAACAGAGAGACGATCAAGACAAtgctgattttttttgttttttgtctaCTTTATTTCCTGGACATAAAGAACTAGCAGTCTTTTTCTAGCGTACCATTGTGTAATACCATGTCATGTTTCAACTACTCTGTCGTGTGCTTTTGTATCGCCCAATCTTGTGTTTTTTTGTTCGTTTTTGTTTTGCAGTCATCCCCTTTCATACAGTCTCTTGTTGCCTGTTTCTCCATCACATAAAACAATCAGGTTTCTACAACTCGTGGGGTTCCAAAATCAAGTGCATATTTATTTGTAAATGTTTCTTAGGTAAATACTAGCATCCTTGTGATTATTTATGTTGATAATATTTAATGCTTGTTGTATTGTATAGCTCCCTCTCTTTAGAACAGGAACTGCACTGTGCCACTAATGTCCACAGCATCTGGATCCAGCCGTTAGTATCACTGTTGGGCAATCCAGATGATTTTCAAATCATCAAACCAACAATACACCTACAGTACTCCTAGTCCTTAGTGGTTGATGCCTGGGAGTGGGCCTTTGGAATGTGCCACTCGGTAAAGTGCGGGTCAGACTAAGGCGTGGCGGTGTTCTGGTGAGTTTGGCCACTGGCGTTGGAAAAGTCCTCAACCTCAAGTAATGTAGCCTCTTGTATTTACACTTCTACATCCAGGAGCCTCGGGCCAGCTCTTTTAATCATGCCACTGGTGCACTATAACCCAGTGGTCtggtctcactctgtgtgtgtgtgtgtgtgtgtgtgtgttagtttatgtgtgtatgtatgcattagtttgtgtgtgtgtgtgtgtgttttaaaatgTCTTGAGGCACATTCCAACCCCATCATTAATACACTGTTAGAAATAGAGGCCTGTATGGTCAGAAATACTGTGTGTTCTCTGCTTCAACCAGAGACTGTAATCTGGTTGTGGATTCTTGAACTTCCAGCTGCTCTAGCAACACGTTTCAGCtcatacacatcacacacacacatcacacacacacacacacacaccacagacacgtTTATCTAATGTATTTCTAATGCTGTTTTTGGTAATGATTTTACCACATCTACAGTACACTGCAAAATATTCCCATATCCACACTGCTCAGTGTAATCTAACCACGGTGCTTTGTAGGGGTGAGACGTAGCATGTTGATGTACTACTGCAAGCAAGCTAAGTTTTTACTATTTTTACTCAAAGGCACGTTTACCTTTAAAACGTCTGGTTTATGGTGCATTTATTGGCCTAGTTGGAATATGAGGCTGTGCGTAACAAAAATGGCCGCCAACAGCTGTTTTCAAATTATCAGTGTACATGTTTGTATCCCTCTTTGCCTCTCTATTCATTCAGATTGAGGTTGGGGTTCAATCCCATCGCGGGTTAAATGCATCGTGGTGTTTTAAAGGCAATTGAgtcgacatatgcagcgtttatcGTGAATGGGAACATTGCCTTAAAAAGCCTCAATGCCCATAACTTGCGATCGGATTGGATCCCGGCCAAAGTCCAACTAGGCTGCGAGTTAGAGCTAGCTCTTCACCAcaagatgagggagagatgaggagaaaggtttacagggaggggagaaagagttACGCATCTGGTCCATTTTTGGATCCCTCTCTTTTCTGTTTAAACAACTTCAAATCTGaaatgggcagagagagagagatgatgatgtCACTCAGAACATGTGAACCCATTTTACCTGTACAACGCTTTTTGGGAGGGGacaggatgggaggaggagggggggggtgtattgGGTAAAGGGAGTAGGGGAGAAACAACAAAagagtggaggggggagagaggggaggggttggGTGTTTTGGGTAAAGGGAGTAGGGGAGAAACAACAACAATGTTTGTTTTGCACCTTAGACTTTTCTACTCCATTGTACTTCTATTGACAGTCGCCAACTCGGTGACGAACGGCTGTATATAAAAAGTAATAAACCTCTTTACAAATGTT
>XM_036958233.1
TAACTGCAAActtccagacagagagagcgctgGGCGGAGAGAAACAGTTGCGTCTCGTTTTACAgcgaagagagagaaggagatacagAAAAACAGTGAAGGGGACAGATTTTAAAGCGCAGTCTTCCCTCGGCGCACTTGCTGATAAGACACGATTAGCTCTCTATATTATAGTTGCCTGCCAGCACCGTGGTGCAAAACTGCAGATGCAAGCATTCAAACAAGATCCGCTCAGTTTCTGAGCCGAACAGGACATGCAGGCACAGGCAGTTTGACTATCGAGAGTTttgaaagagggaggaggacggaaggaaggaagcaaaaagggaagaggaggagaaaagagccgGAGAAAAGTTTGAAAGGATACGCGAGACCGGAGACGTTGCCGGTTGGTCACCGTAAAGAAAGGCTATTCAAAGCTGGTATCGCGGGGAAAATCTATCCTCGGATAAACAGACGAGGGTCGGTCGTTGGCCGCTGCCGGGTGGGGAGAGGGATTGTATTGATATTCGGCAGCTGCCGGGAACGCGCCTGATTCCGTTTGCTGTTTGGGGAATAGATGCGCTGGGAAGCCACGATGCGGAGCGATCCCATTTTGTTCGCTTCCAGGGCCATGGAGGAGTTGGTGTGTGAGCTTCGTCTGTTCCTGGACCTGCTGGACAGGGAATATCTGAGCGCTGGGGTCAGGGAGAAGAAGATGCTCATCTCCAACATCCTTCACAGGGTCCTCACCGCTAAAGaGCCCTCGTTCAAGTCAGAGGACCACAGCAGCCTTTCTGCACCCCCTCAGATGCCACTCCCTGAGATCCCACACCCCTGGCTCCCTCCAGACAACgggcctcctcctctccccagctgCTCTCTCCCAGAGGGATACTATGAAGAGGCCGTCCCCCTCAGTCCTGGAAAAGCCCCAGAATACATCACTTCCAACTATGATTCTGACCAGATGAGCAGTTCGTATGAGTCGtatgacgaggaggaggaggatgggaagGGAAACAGAGGGAAGAAGATGCGACACCAGTGGCCTAGCGAGGAGGCCTCCATGGGTCTGGTCAAGGACGCACGCATCTGTGCCTTCCTGCTGCGCAAGAAACGCTTCGGCCAGTGGACCAAGCTGCTCTgtgtcatcaaggacaacaagcTGCTGtgCTACAAGTCATCTAAAGACCAGACACCCCAGATGGAGCTGCTGTTATCAGGCTGTAGCATCACACATGTCCCCAAGGACGGCAAGAAGAAGAAACACGAGCTGAAGATAGTCCACCAGGGGGCAGATGCCCTGGTCCTGGCCGTGCAGAGCAAAGAGCAGGCTGAGGAGTGGCTCAAGGTGATGAGGGAGGTGTGCAGTAATGGCTGTGACTCAGATGTAGCAGGGTCTCCTGTGCACAAGCCCGACCTGGAGAAGAAGGTGTTGTGTGATAGGCCGAGCTCAGACGGAGAGCCGCCCAATGAGAACGGACACACCGTCACCGACTgtaAAGGGAAGAAGGACTCTCAGAAGAGTCAGAAGGGAGGCACTCTGAGTAAAGGGGCGGGGAAGAAGATCACTAAGATCATTGGCTTAGGCAAGAAGAAGCCGTCCACTGACGAACAGACCTCTTCAGCCGAGGAGGACATACCCACCTGTGGCTACCTGAACGTGCTGTCCAATAACCGCTGGCGTGAGCGTTGGTGTCGTCTGAAGGACAACCAGCTGCTGCTTCATAAGGACCGTACTGATCTGAAGACCCACACGGCCAGCCTGCCCCTCAGAGGCTGCGAGGTCAGCCCCGGACTGGACTCCAAACACCCCTTCGCCTTCCGCCTTCTCCGCAACGGACAGGAGGTGGCTGTACTGGAGGCGTCCTCCTCAGAGGTCATGGGTCGGTGGCTAGGGATGCTGCTAGCTGAAACAGGCTCTATCACAGACCCTGCTGCCTTACATTACGATTACATAGATGTAGAGACTACCGCAAACGTTATCCAGCTGGCCAAGCAGTCCttctgCTTCACTAGTAAACGTGCTGTATCTCCCAACCCTTATCTGGACAACCCTGCCAACAGTTACGCATGTCCCTCTGGAATGGCACTGCACTATGATGATGTGCCCATCAATGGaacgGACCCTGAGGCGCTGTACTCCAGCCCTGCCACCGGAGGGCGACGTCTGAGAGAGGAGGTGTTGTATGAGAACACTGACCCCGACCTGTATGAGAACATGCCTTCGCCCAAGCTGGCTGCCCGCTACTCCCCCAAGCCCAGTCGTCTggcatcatcctcctcctcctcctcttcctccagccaCTACAAAACCCCTGGCCCTGTCAAATCcaaactcctctcctcttcctccgctTCCTCggctaacactaacactaaagCCGTTGCTCAGCTGAAGGGAAAAAAGGTCCCAGTGACCAATGGGACAGCGTCTAAACAGAAGGTGGACAAGAACCAGGCCAAGAAGACCAATGGAACAACCAATGGAACAGCATCTGTGAAACGCAACAACtccagtgCAGAGCAGTATAAGTACGGTAAGAACCGTGTGGAGGCGGACGCCAAGATGCTGCAGGCTAAAGAGGAGGAGCTAATCAACAGAAAGCAGGACATCAGGAACCGTCTGACCCAGCTGAAGAAGGACAGGAAAGACCTGCGCACCGCCATGGAGGCCAGCACcgCTAAGCGCTCCGCTGGGTCCCTGGCGGAGCGGCTGAAAAAGGTGGAGGACGAGTGCAAGCTGAAGGAGGACGAGCGGGTGAGCCTGGAGCTGGAGATGACAGAGGTCAAGGAGAGTCTGAAGAAGGCCCTGAACGGAGGAGTCACTCTGGGACTCACCATCGAGCCCAAGTCTGGCACCTCCAGCCCACAGTCCCCAGTGTTGCTGAGGCGTACCCTAGAGAACTCTCCCATCTCCAGCTGTGACACCAGCGACACAGAGAGCTGTTCTACTCTGCCCGTCAACAGTGCCTCCCTCCTCCGCAGAACGACCAATCAGAAACCCTCGGCCGTCCGCGGCCATGTCCTCAAGAAGGCAAAGGAATGGGAGATGAAGACTGGCACATGAGCAacaactctgttcacaacagtcCTATCTTATTAGctttctattttattttaatgcgtgtatatatttatttaaatcaGTTCGTATGGGGAGGAAGGTTGAAGAGGAGTACACTACAAGCATAGCCAAACAGAGAGACGATCAAGACAAtgctgattttttttgttttttgtctaCTTTATTTCCTGGACATAAAGAACTAGCAGTCTTTTTCTAGCGTACCATTGTGTAATACCATGTCATGTTTCAACTACTCTGTCGTGTGCTTTTGTATCGCCCAATCTTGTGTTTTTTTGTTCGTTTTTGTTTTGCAGTCATCCCCTTTCATACAGTCTCTTGTTGCCTGTTTCTCCATCACATAAAACAATCAGGTTTCTACAACTCGTGGGGTTCCAAAATCAAGTGCATATTTATTTGTAAATGTTTCTTAGGTAAATACTAGCATCCTTGTGATTATTTATGTTGATAATATTTAATGCTTGTTGTATTGTATAGCTCCCTCTCTTTAGAACAGGAACTGCACTGTGCCACTAATGTCCACAGCATCTGGATCCAGCCGTTAGTATCACTGTTGGGCAATCCAGATGATTTTCAAATCATCAAACCAACAATACACCTACAGTACTCCTAGTCCTTAGTGGTTGATGCCTGGGAGTGGGCCTTTGGAATGTGCCACTCGGTAAAGTGCGGGTCAGACTAAGGCGTGGCGGTGTTCTGGTGAGTTTGGCCACTGGCGTTGGAAAAGTCCTCAACCTCAAGTAATGTAGCCTCTTGTATTTACACTTCTACATCCAGGAGCCTCGGGCCAGCTCTTTTAATCATGCCACTGGTGCACTATAACCCAGTGGTCtggtctcactctgtgtgtgtgtgtgtgtgtgtgtgtgttagtttatgtgtgtatgtatgcattagtttgtgtgtgtgtgtgtgtgttttaaaatgTCTTGAGGCACATTCCAACCCCATCATTAATACACTGTTAGAAATAGAGGCCTGTATGGTCAGAAATACTGTGTGTTCTCTGCTTCAACCAGAGACTGTAATCTGGTTGTGGATTCTTGAACTTCCAGCTGCTCTAGCAACACGTTTCAGCtcatacacatcacacacacacatcacacacacacacacacacaccacagacacgtTTATCTAATGTATTTCTAATGCTGTTTTTGGTAATGATTTTACCACATCTACAGTACACTGCAAAATATTCCCATATCCACACTGCTCAGTGTAATCTAACCACGGTGCTTTGTAGGGGTGAGACGTAGCATGTTGATGTACTACTGCAAGCAAGCTAAGTTTTTACTATTTTTACTCAAAGGCACGTTTACCTTTAAAACGTCTGGTTTATGGTGCATTTATTGGCCTAGTTGGAATATGAGGCTGTGCGTAACAAAAATGGCCGCCAACAGCTGTTTTCAAATTATCAGTGTACATGTTTGTATCCCTCTTTGCCTCTCTATTCATTCAGATTGAGGTTGGGGTTCAATCCCATCGCGGGTTAAATGCATCGTGGTGTTTTAAAGGCAATTGAgtcgacatatgcagcgtttatcGTGAATGGGAACATTGCCTTAAAAAGCCTCAATGCCCATAACTTGCGATCGGATTGGATCCCGGCCAAAGTCCAACTAGGCTGCGAGTTAGAGCTAGCTCTTCACCAcaagatgagggagagatgaggagaaaggtttacagggaggggagaaagagttACGCATCTGGTCCATTTTTGGATCCCTCTCTTTTCTGTTTAAACAACTTCAAATCTGaaatgggcagagagagagagatgatgatgtCACTCAGAACATGTGAACCCATTTTACCTGTACAACGCTTTTTGGGAGGGGacaggatgggaggaggagggggggggtgtattgGGTAAAGGGAGTAGGGGAGAAACAACAAAagagtggaggggggagagaggggaggggttggGTGTTTTGGGTAAAGGGAGTAGGGGAGAAACAACAACAATGTTTGTTTTGCACCTTAGACTTTTCTACTCCATTGTACTTCTATTGACAGTCGCCAACTCGGTGACGAACGGCTGTATATAAAAAGTAATAAACCTCTTTACAAATGTT
>XM_036958232.1
ACTGCAAActtccagacagagagagcgctgGGCGGAGAGAAACAGTTGCGTCTCGTTTTACAgcgaagagagagaaggagatacagAAAAACAGTGAAGGGGACAGATTTTAAAGCGCAGTCTTCCCTCGGCGCACTTGCTGATAAGACACGATTAGCTCTCTATATTATAGTTGCCTGCCAGCACCGTGGTGCAAAACTGCAGATGCAAGCATTCAAACAAGATCCGCTCAGTTTCTGAGCCGAACAGGACATGCAGGCACAGGCAGTTTGACTATCGAGAGTTttgaaagagggaggaggacggaaggaaggaagcaaaaagggaagaggaggagaaaagagccgGAGAAAAGTTTGAAAGGATACGCGAGACCGGAGACGTTGCCGGTTGGTCACCGTAAAGAAAGGCTATTCAAAGCTGGTATCGCGGGGAAAATCTATCCTCGGATAAACAGACGAGGGTCGGTCGTTGGCCGCTGCCGGGTGGGGAGAGGGATTGTATTGATATTCGGCAGCTGCCGGGAACGCGCCTGATTCCGTTTGCTGTTTGGGGAATAGATGCGCTGGGAAGCCACGATGCGGAGCGATCCCATTTTGTTCGCTTCCAGGGCCATGGAGGAGTTGGTGTGTGAGCTTCGTCTGTTCCTGGACCTGCTGGACAGGGAATATCTGAGCGCTGGGGTCAGGGAGAAGAAGATGCTCATCTCCAACATCCTTCACAGGGTCCTCACCGCTAAAGaGCCCTCGTTCAAGTCAGAGGACCACAGCAGCCTTTCTGCACCCCCTCAGATGCCACTCCCTGAGATCCCACACCCCTGGCTCCCTCCAGACAACgggcctcctcctctccccagctgCTCTCTCCCAGAGGGATACTATGAAGAGGCCGTCCCCCTCAGTCCTGGAAAAGCCCCAGAATACATCACTTCCAACTATGATTCTGACCAGATGAGCAGTTCGTATGAGTCGtatgacgaggaggaggaggatgggaagGGAAACAGAGGGAAGAAGATGCGACACCAGTGGCCTAGCGAGGAGGCCTCCATGGGTCTGGTCAAGGACGCACGCATCTGTGCCTTCCTGCTGCGCAAGAAACGCTTCGGCCAGTGGACCAAGCTGCTCTgtgtcatcaaggacaacaagcTGCTGtgCTACAAGTCATCTAAAGACCAGACACCCCAGATGGAGCTGCTGTTATCAGGCTGTAGCATCACACATGTCCCCAAGGACGGCAAGAAGAAGAAACACGAGCTGAAGATAGTCCACCAGGGGGCAGATGCCCTGGTCCTGGCCGTGCAGAGCAAAGAGCAGGCTGAGGAGTGGCTCAAGGTGATGAGGGAGGTGTGCAGTAATGGCTGTGACTCAGATGTAGCAGGGTCTCCTGTGCACAAGCCCGACCTGGAGAAGAAGGTGTTGTGTGATAGGCCGAGCTCAGACGGAGAGCCGCCCAATGAGAACGGACACACCGTCACCGACTGTAAGGACCAAGgtaAAGGGAAGAAGGACTCTCAGAAGAGTCAGAAGGGAGGCACTCTGAGTAAAGGGGCGGGGAAGAAGATCACTAAGATCATTGGCTTAGGCAAGAAGAAGCCGTCCACTGACGAACAGACCTCTTCAGCCGAGGAGGACATACCCACCTGTGGCTACCTGAACGTGCTGTCCAATAACCGCTGGCGTGAGCGTTGGTGTCGTCTGAAGGACAACCAGCTGCTGCTTCATAAGGACCGTACTGATCTGAAGACCCACACGGCCAGCCTGCCCCTCAGAGGCTGCGAGGTCAGCCCCGGACTGGACTCCAAACACCCCTTCGCCTTCCGCCTTCTCCGCAACGGACAGGAGGTGGCTGTACTGGAGGCGTCCTCCTCAGAGGTCATGGGTCGGTGGCTAGGGATGCTGCTAGCTGAAACAGGCTCTATCACAGACCCTGCTGCCTTACATTACGATTACATAGATGTAGAGACTACCGCAAACGTTATCCAGCTGGCCAAGCAGTCCttctgCTTCACTAGTAAACGTGCTGTATCTCCCAACCCTTATCTGGACAACCCTGCCAACAGTTACGCATGTCCCTCTGGAATGGCACTGCACTATGATGATGTGCCCATCAATGGaacgGACCCTGAGGCGCTGTACTCCAGCCCTGCCACCGGAGGGCGACGTCTGAGAGAGGAGGTGTTGTATGAGAACACTGACCCCGACCTGTATGAGAACATGCCTTCGCCCAAGCTGGCTGCCCGCTACTCCCCCAAGCCCAGTCGTCTggcatcatcctcctcctcctcctcttcctccagccaCTACAAAACCCCTGGCCCTGTCAAATCcaaactcctctcctcttcctccgctTCCTCggctaacactaacactaaagCCGTTGCTCAGCTGAAGGGAAAAAAGGTCCCAGTGACCAATGGGACAGCGTCTAAACAGAAGGTGGACAAGAACCAGGCCAAGAAGACCAATGGAACAACCAATGGAACAGCATCTGTGAAACGCAACAACtccagtgCAGAGCAGTATAAGTACGGTAAGAACCGTGTGGAGGCGGACGCCAAGATGCTGCAGGCTAAAGAGGAGGAGCTAATCAACAGAAAGCAGGACATCAGGAACCGTCTGACCCAGCTGAAGAAGGACAGGAAAGACCTGCGCACCGCCATGGAGGCCAGCACcgCTAAGCGCTCCGCTGGGTCCCTGGCGGAGCGGCTGAAAAAGGTGGAGGACGAGTGCAAGCTGAAGGAGGACGAGCGGGTGAGCCTGGAGCTGGAGATGACAGAGGTCAAGGAGAGTCTGAAGAAGGCCCTGAACGGAGGAGTCACTCTGGGACTCACCATCGAGCCCAAGTCTGGCACCTCCAGCCCACAGTCCCCAGTGTTGCTGAGGCGTACCCTAGAGAACTCTCCCATCTCCAGCTGTGACACCAGCGACACAGAGAGCTGTTCTACTCTGCCCGTCAACAGTGCCTCCCTCCTCCGCAGAACGACCAATCAGAAACCCTCGGCCGTCCGCGGCCATGTCCTCAAGAAGGCAAAGGAATGGGAGATGAAGACTGGCACATGAGCAacaactctgttcacaacagtcCTATCTTATTAGctttctattttattttaatgcgtgtatatatttatttaaatcaGTTCGTATGGGGAGGAAGGTTGAAGAGGAGTACACTACAAGCATAGCCAAACAGAGAGACGATCAAGACAAtgctgattttttttgttttttgtctaCTTTATTTCCTGGACATAAAGAACTAGCAGTCTTTTTCTAGCGTACCATTGTGTAATACCATGTCATGTTTCAACTACTCTGTCGTGTGCTTTTGTATCGCCCAATCTTGTGTTTTTTTGTTCGTTTTTGTTTTGCAGTCATCCCCTTTCATACAGTCTCTTGTTGCCTGTTTCTCCATCACATAAAACAATCAGGTTTCTACAACTCGTGGGGTTCCAAAATCAAGTGCATATTTATTTGTAAATGTTTCTTAGGTAAATACTAGCATCCTTGTGATTATTTATGTTGATAATATTTAATGCTTGTTGTATTGTATAGCTCCCTCTCTTTAGAACAGGAACTGCACTGTGCCACTAATGTCCACAGCATCTGGATCCAGCCGTTAGTATCACTGTTGGGCAATCCAGATGATTTTCAAATCATCAAACCAACAATACACCTACAGTACTCCTAGTCCTTAGTGGTTGATGCCTGGGAGTGGGCCTTTGGAATGTGCCACTCGGTAAAGTGCGGGTCAGACTAAGGCGTGGCGGTGTTCTGGTGAGTTTGGCCACTGGCGTTGGAAAAGTCCTCAACCTCAAGTAATGTAGCCTCTTGTATTTACACTTCTACATCCAGGAGCCTCGGGCCAGCTCTTTTAATCATGCCACTGGTGCACTATAACCCAGTGGTCtggtctcactctgtgtgtgtgtgtgtgtgtgtgtgtgttagtttatgtgtgtatgtatgcattagtttgtgtgtgtgtgtgtgtgttttaaaatgTCTTGAGGCACATTCCAACCCCATCATTAATACACTGTTAGAAATAGAGGCCTGTATGGTCAGAAATACTGTGTGTTCTCTGCTTCAACCAGAGACTGTAATCTGGTTGTGGATTCTTGAACTTCCAGCTGCTCTAGCAACACGTTTCAGCtcatacacatcacacacacacatcacacacacacacacacacaccacagacacgtTTATCTAATGTATTTCTAATGCTGTTTTTGGTAATGATTTTACCACATCTACAGTACACTGCAAAATATTCCCATATCCACACTGCTCAGTGTAATCTAACCACGGTGCTTTGTAGGGGTGAGACGTAGCATGTTGATGTACTACTGCAAGCAAGCTAAGTTTTTACTATTTTTACTCAAAGGCACGTTTACCTTTAAAACGTCTGGTTTATGGTGCATTTATTGGCCTAGTTGGAATATGAGGCTGTGCGTAACAAAAATGGCCGCCAACAGCTGTTTTCAAATTATCAGTGTACATGTTTGTATCCCTCTTTGCCTCTCTATTCATTCAGATTGAGGTTGGGGTTCAATCCCATCGCGGGTTAAATGCATCGTGGTGTTTTAAAGGCAATTGAgtcgacatatgcagcgtttatcGTGAATGGGAACATTGCCTTAAAAAGCCTCAATGCCCATAACTTGCGATCGGATTGGATCCCGGCCAAAGTCCAACTAGGCTGCGAGTTAGAGCTAGCTCTTCACCAcaagatgagggagagatgaggagaaaggtttacagggaggggagaaagagttACGCATCTGGTCCATTTTTGGATCCCTCTCTTTTCTGTTTAAACAACTTCAAATCTGaaatgggcagagagagagagatgatgatgtCACTCAGAACATGTGAACCCATTTTACCTGTACAACGCTTTTTGGGAGGGGacaggatgggaggaggagggggggggtgtattgGGTAAAGGGAGTAGGGGAGAAACAACAAAagagtggaggggggagagaggggaggggttggGTGTTTTGGGTAAAGGGAGTAGGGGAGAAACAACAACAATGTTTGTTTTGCACCTTAGACTTTTCTACTCCATTGTACTTCTATTGACAGTCGCCAACTCGGTGACGAACGGCTGTATATAAAAAGTAATAAACCTCTTTACAAATGTT
>XM_036958235.1
AAActtccagacagagagagcgctgGGCGGAGAGAAACAGTTGCGTCTCGTTTTACAgcgaagagagagaaggagatacagAAAAACAGTGAAGGGGACAGATTTTAAAGCGCAGTCTTCCCTCGGCGCACTTGCTGATAAGACACGATTAGCTCTCTATATTATAGTTGCCTGCCAGCACCGTGGTGCAAAACTGCAGATGCAAGCATTCAAACAAGATCCGCTCAGTTTCTGAGCCGAACAGGACATGCAGGCACAGGCAGTTTGACTATCGAGAGTTttgaaagagggaggaggacggaaggaaggaagcaaaaagggaagaggaggagaaaagagccgGAGAAAAGTTTGAAAGGATACGCGAGACCGGAGACGTTGCCGGTTGGTCACCGTAAAGAAAGGCTATTCAAAGCTGGTATCGCGGGGAAAATCTATCCTCGGATAAACAGACGAGGGTCGGTCGTTGGCCGCTGCCGGGTGGGGAGAGGGATTGTATTGATATTCGGCAGCTGCCGGGAACGCGCCTGATTCCGTTTGCTGTTTGGGGAATAGATGCGCTGGGAAGCCACGATGCGGAGCGATCCCATTTTGTTCGCTTCCAGGGCCATGGAGGAGTTGGTGTGTGAGCTTCGTCTGTTCCTGGACCTGCTGGACAGGGAATATCTGAGCGCTGGGGTCAGGGAGAAGAAGATGCTCATCTCCAACATCCTTCACAGGGTCCTCACCGCTAAAGaGCCCTCGTTCAAGTCAGAGGACCACAGCAGCCTTTCTGCACCCCCTCAGATGCCACTCCCTGAGATCCCACACCCCTGGCTCCCTCCAGACAACgggcctcctcctctccccagctgCTCTCTCCCAGAGGGATACTATGAAGAGGCCGTCCCCCTCAGTCCTGGAAAAGCCCCAGAATACATCACTTCCAACTATGATTCTGACCAGATGAGCAGTTCGTATGAGTCGtatgacgaggaggaggaggatgggaagGGAAACAGAGGGAAGAAGATGCGACACCAGTGGCCTAGCGAGGAGGCCTCCATGGGTCTGGTCAAGGACGCACGCATCTGTGCCTTCCTGCTGCGCAAGAAACGCTTCGGCCAGTGGACCAAGCTGCTCTgtgtcatcaaggacaacaagcTGCTGtgCTACAAGTCATCTAAAGACCAGACACCCCAGATGGAGCTGCTGTTATCAGGCTGTAGCATCACACATGTCCCCAAGGACGGCAAGAAGAAGAAACACGAGCTGAAGATAGTCCACCAGGGGGCAGATGCCCTGGTCCTGGCCGTGCAGAGCAAAGAGCAGGCTGAGGAGTGGCTCAAGGTGATGAGGGAGGTGTGCAGTAATGGCTGTGACTCAGATGTAGCAGGGTCTCCTGTGCACAAGCCCGACCTGGAGAAGAAGGTGTTGTGTGATAGGCCGAGCTCAGACGGAGAGCCGCCCAATGAGAACGGACACACCGTCACCGACTGTAAGGACCAAGgtaAAGGGAAGAAGGACTCTCAGAAGAGTCAGAAGGGAGGCACTCTGAGTAAAGGGGCGGGGAAGAAGATCACTAAGATCATTGGCTTAGGCAAGAAGAAGCCGTCCACTGACGAACAGACCTCTTCAGCCGAGGAGGACATACCCACCTGTGGCTACCTGAACGTGCTGTCCAATAACCGCTGGCGTGAGCGTTGGTGTCGTCTGAAGGACAACCAGCTGCTGCTTCATAAGGACCGTACTGATCTGAAGACCCACACGGCCAGCCTGCCCCTCAGAGGCTGCGAGGTCAGCCCCGGACTGGACTCCAAACACCCCTTCGCCTTCCGCCTTCTCCGCAACGGACAGGAGGTGGCTGTACTGGAGGCGTCCTCCTCAGAGGTCATGGGTCGGTGGCTAGGGATGCTGCTAGCTGAAACAGGCTCTATCACAGACCCTGCTGCCTTACATTACGATTACATAGATGTAGAGACTACCGCAAACGTTATCCAGCTGGCCAAGCAGTCCttctgCTTCACTAGTAAACGTGCTGTATCTCCCAACCCTTATCTGGACAACCCTGCCAACAGTTACGCATGTCCCTCTGGAATGGCACTGCACTATGATGATGTGCCCATCAATGGaacgCTGAAGGGAAAAAAGGTCCCAGTGACCAATGGGACAGCGTCTAAACAGAAGGTGGACAAGAACCAGGCCAAGAAGACCAATGGAACAACCAATGGAACAGCATCTGTGAAACGCAACAACtccagtgCAGAGCAGTATAAGTACGGTAAGAACCGTGTGGAGGCGGACGCCAAGATGCTGCAGGCTAAAGAGGAGGAGCTAATCAACAGAAAGCAGGACATCAGGAACCGTCTGACCCAGCTGAAGAAGGACAGGAAAGACCTGCGCACCGCCATGGAGGCCAGCACcgCTAAGCGCTCCGCTGGGTCCCTGGCGGAGCGGCTGAAAAAGGTGGAGGACGAGTGCAAGCTGAAGGAGGACGAGCGGGTGAGCCTGGAGCTGGAGATGACAGAGGTCAAGGAGAGTCTGAAGAAGGCCCTGAACGGAGGAGTCACTCTGGGACTCACCATCGAGCCCAAGTCTGGCACCTCCAGCCCACAGTCCCCAGTGTTGCTGAGGCGTACCCTAGAGAACTCTCCCATCTCCAGCTGTGACACCAGCGACACAGAGAGCTGTTCTACTCTGCCCGTCAACAGTGCCTCCCTCCTCCGCAGAACGACCAATCAGAAACCCTCGGCCGTCCGCGGCCATGTCCTCAAGAAGGCAAAGGAATGGGAGATGAAGACTGGCACATGAGCAacaactctgttcacaacagtcCTATCTTATTAGctttctattttattttaatgcgtgtatatatttatttaaatcaGTTCGTATGGGGAGGAAGGTTGAAGAGGAGTACACTACAAGCATAGCCAAACAGAGAGACGATCAAGACAAtgctgattttttttgttttttgtctaCTTTATTTCCTGGACATAAAGAACTAGCAGTCTTTTTCTAGCGTACCATTGTGTAATACCATGTCATGTTTCAACTACTCTGTCGTGTGCTTTTGTATCGCCCAATCTTGTGTTTTTTTGTTCGTTTTTGTTTTGCAGTCATCCCCTTTCATACAGTCTCTTGTTGCCTGTTTCTCCATCACATAAAACAATCAGGTTTCTACAACTCGTGGGGTTCCAAAATCAAGTGCATATTTATTTGTAAATGTTTCTTAGGTAAATACTAGCATCCTTGTGATTATTTATGTTGATAATATTTAATGCTTGTTGTATTGTATAGCTCCCTCTCTTTAGAACAGGAACTGCACTGTGCCACTAATGTCCACAGCATCTGGATCCAGCCGTTAGTATCACTGTTGGGCAATCCAGATGATTTTCAAATCATCAAACCAACAATACACCTACAGTACTCCTAGTCCTTAGTGGTTGATGCCTGGGAGTGGGCCTTTGGAATGTGCCACTCGGTAAAGTGCGGGTCAGACTAAGGCGTGGCGGTGTTCTGGTGAGTTTGGCCACTGGCGTTGGAAAAGTCCTCAACCTCAAGTAATGTAGCCTCTTGTATTTACACTTCTACATCCAGGAGCCTCGGGCCAGCTCTTTTAATCATGCCACTGGTGCACTATAACCCAGTGGTCtggtctcactctgtgtgtgtgtgtgtgtgtgtgtgtgttagtttatgtgtgtatgtatgcattagtttgtgtgtgtgtgtgtgtgttttaaaatgTCTTGAGGCACATTCCAACCCCATCATTAATACACTGTTAGAAATAGAGGCCTGTATGGTCAGAAATACTGTGTGTTCTCTGCTTCAACCAGAGACTGTAATCTGGTTGTGGATTCTTGAACTTCCAGCTGCTCTAGCAACACGTTTCAGCtcatacacatcacacacacacatcacacacacacacacacacaccacagacacgtTTATCTAATGTATTTCTAATGCTGTTTTTGGTAATGATTTTACCACATCTACAGTACACTGCAAAATATTCCCATATCCACACTGCTCAGTGTAATCTAACCACGGTGCTTTGTAGGGGTGAGACGTAGCATGTTGATGTACTACTGCAAGCAAGCTAAGTTTTTACTATTTTTACTCAAAGGCACGTTTACCTTTAAAACGTCTGGTTTATGGTGCATTTATTGGCCTAGTTGGAATATGAGGCTGTGCGTAACAAAAATGGCCGCCAACAGCTGTTTTCAAATTATCAGTGTACATGTTTGTATCCCTCTTTGCCTCTCTATTCATTCAGATTGAGGTTGGGGTTCAATCCCATCGCGGGTTAAATGCATCGTGGTGTTTTAAAGGCAATTGAgtcgacatatgcagcgtttatcGTGAATGGGAACATTGCCTTAAAAAGCCTCAATGCCCATAACTTGCGATCGGATTGGATCCCGGCCAAAGTCCAACTAGGCTGCGAGTTAGAGCTAGCTCTTCACCAcaagatgagggagagatgaggagaaaggtttacagggaggggagaaagagttACGCATCTGGTCCATTTTTGGATCCCTCTCTTTTCTGTTTAAACAACTTCAAATCTGaaatgggcagagagagagagatgatgatgtCACTCAGAACATGTGAACCCATTTTACCTGTACAACGCTTTTTGGGAGGGGacaggatgggaggaggagggggggggtgtattgGGTAAAGGGAGTAGGGGAGAAACAACAAAagagtggaggggggagagaggggaggggttggGTGTTTTGGGTAAAGGGAGTAGGGGAGAAACAACAACAATGTTTGTTTTGCACCTTAGACTTTTCTACTCCATTGTACTTCTATTGACAGTCGCCAACTCGGTGACGAACGGCTGTATATAAAAAGTAATAAACCTCTTTACAAATGTT

Function

symbol description
afap1 Predicted to act upstream of or within regulation of cytoskeleton organization and regulation of signal transduction. Is expressed in brain. Human ortholog(s) of this gene implicated in open-angle glaucoma. Orthologous to human AFAP1 (actin filament associated protein 1).

NR:

description
PREDICTED: actin filament-associated protein 1 isoform X4

GO: NA

KEGG:

id description
K18616 AFAP1; actin filament associated protein 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036958234.1 False 4709 mRNA 0.50 18 54349344 54508277
XM_036958233.1 False 5163 mRNA 0.50 18 54417336 54508277
XM_036958232.1 False 5173 mRNA 0.50 18 54417338 54508277
XM_036958235.1 True 4898 mRNA 0.50 17 54417343 54508277

Neighbor

gene id symbol gene type direction distance location
LOC110500735 ablim2 coding upstream 6763 54206483 ~ 54342581 (+)
si:dkey-219e21.4 LOC106608570 coding upstream 146442 54199722 ~ 54202902 (+)
LOC110500729 md2l1 coding upstream 278801 54067452 ~ 54070543 (+)
LOC110500727 LOC106608576 coding upstream 458017 53736004 ~ 53891327 (+)
LOC118942947 NA coding upstream 576019 53769687 ~ 53773325 (+)
LOC110500744 grpel1 coding downstream 447270 54955547 ~ 54960002 (+)
ccdc96 ccdc96 coding downstream 457957 54966234 ~ 54968068 (+)
LOC110500741 LOC106595343 coding downstream 474515 54982792 ~ 54986995 (+)
smim20 NA coding downstream 623691 55131968 ~ 55133176 (+)
LOC110500752 NA coding downstream 633947 55142224 ~ 55148988 (+)
G1752727 NA non-coding upstream 1169 54344087 ~ 54348175 (+)
G1752782 NA non-coding upstream 26137 54322034 ~ 54323207 (+)
G1752724 NA non-coding upstream 151695 54197051 ~ 54197649 (+)
G1752664 NA non-coding upstream 259659 54087684 ~ 54089685 (+)
G1752639 NA non-coding upstream 275177 54072150 ~ 54074167 (+)
G1752853 NA non-coding downstream 5350 54513627 ~ 54515753 (+)
G1752942 NA non-coding downstream 195792 54704069 ~ 54704901 (+)
G1752969 NA non-coding downstream 240568 54748845 ~ 54750853 (+)
G1752932 NA non-coding downstream 252172 54760449 ~ 54762436 (+)
G1752975 NA non-coding downstream 255632 54763909 ~ 54765493 (+)
LOC110500722 NA other upstream 1092743 53251413 ~ 53256660 (+)
G1751699 LOC106608599 other upstream 1376961 52962449 ~ 52972383 (+)
G1750050 NA other upstream 2152337 52191200 ~ 52197007 (+)
G1750030 LOC106608688 other upstream 2254239 52094709 ~ 52095105 (+)
G1753100 NA other downstream 493302 55001579 ~ 55011678 (+)
LOC110500754 LOC106591080 other downstream 1082328 55590450 ~ 55592100 (+)
G1755158 NA other downstream 1878130 56386407 ~ 56387622 (+)
G1755570 NA other downstream 2285454 56793731 ~ 56794574 (+)
G1756789 NA other downstream 3418203 57926480 ~ 57928244 (+)

Expression


Co-expression Network