XLOC_036513


Basic Information

Item Value
gene id XLOC_036513
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007119.7
NCBI id CM002892.2
chromosome length 54304671
location 28462504 ~ 28465453 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00072476
tgttttctaatCAATGTAGATTGGTCCTTTAACCACTGAGGTGCAAGACAACGTTGACgggaaaattcattcattcattcataatgttTGTTAAACTTCACAAACTTGTTCTTGATGAGAAGAAATGAATGACCCACCACTATAAGCAAAGTAAAAAAACACAGATCAGATTTCCAGTtctttattaatttcattatataaatacaaacttAATGACATACATCTTTTCCAAAACAGGAAACAACAAAAAGGCATTAAGGCGTTATTTTCAGTTTTCAACAAGTAGCCATCCTACAAAAAACTTTCTATATGTGAGACTTTGAGGTGTATGGCAAAATTCGCAGAGAGGCAGCATAACAGGCTTCTCCCATTAAATCAGTAAGAACAAACTTTCAGTAACAAGTGTGAATGCCAAAGGTTTTCAATCTTCTGACCCCAATGAATCAGCTTTGCTTTATTATCTAAaggaaaactatatatatatatatatatatatatatatatatattgtataagttCAACCTCACAGCTCCATACTGCTGCACTGTGCATGGAAATATCTATTATCACTCTAAACTTGTATGTTAGCTAATACAATCGCCATATTACCACAATATCAATGTCCTTTATACATTGCACACCAATCTAGTAACAGTTCTTAAGCAAAATCCTACATTTCTggatttaaataatcataattataccAGACAAAAGCACAGAAGTCCTCACTGCATCACCACATTACAAGCACAGGCTCCATCACACCGCTTCCATCATTTTATTAGGAAATAAGCTCAGAAATGTTACAGCTGGTGAAGACCTTCATGATccgtatttaaaaaaagatatgtaATATGATATGATCCTTCAGACTTTTCAATGTTGAATGTAGGAGGGGAATAAAAATGTCCAAATAAGAACTCATTGCTTAACCAAATAGCATAGGCTTATATATTGTCCAATGGCAACATGTAACAGTTTCTAAGAAATTGGTTAAAGCTCCAGTTCCCTGTACAGTGAAAATAACCACTGGAGTGTCCTCTTCAAATAAACACAGACCAAGCCTACTTTGACAGATCTATTAGCGGAGCAAAAATAAGTTTGGCATCTCGTATACAGTATCAGCATAGAAATATAGAGATATTAATCGACTGTCAAAAATACTACAATATTCCACTAAACAAATCTTCCTGAATTCAGAAAAATATGATCTCACACAACACATGACGCATTATGAATCAGCTCAAAACACCtcgtatatgttttttttttggcagttttgGCTGACTCAGTTGTAACAGTTTGACAACCCAGACAAATGAATTTGCTTTCTAAAACACATTCTCTGACCTTCTGTAAAGCTGACCTACCTAAACATGTACTATCACCATACTGACCTATAGAAGCACAACAACTGACTTATTGTTGCTTGACTGTAACAGGGTTTTGGCATGACaatgcacacaagcacacacattttttgtttgttttaacaggGCTGATGATCAGATATATATTTTACTGATAATCATTTGTGCAAATATGGTGTTAATATTCTAGAAAAactgatgataaaaaaaatggcACAATCAAAAATGTAACACGATATAAAATATCAGTTGTACCTCTCATCTTCCGTTCCCTCACTTATACAAGACGACTGTTACATTGGTAACCACATACATTAGAAACACTGTCTAAACTACACTGCTCCGATAGCAACACTCATTTTTAATGCAAAGCGaaaatcatttgaataatttCTACTCATTAAAAATATGACTACTGCTAGATTTAAATATAAggtcaagtaaataaatctttttttttctagtcCATTGTCATTGCAGctttataatagaaaatatatatatagcgctCATTAAATAAGCAGTTAGTAGTAGTTTTAAGTGACTAGACAGCTAGATGTTGGTTCTGTCGTTTTCATCATGCTgataaaatttgttgtttttattaaataaagacctACAAGCTGTGTAATTTAACATGCTAGTGTTAAACTGAACATTTCAACTATTAAGTAACAATACCGGCAAACTTAATACCCAAGCAATATAGTTAAAATTGAAGTTTGTCAGTCGGTTGGTCAAAAATCGCATCAACTTACGGATAAAAGATAAACATTGGATACAAACGAGACCTTTTCTAAGTGTTTTGTTATCTGTGAGGACACCAATGTTGGTTTCTTCAAACATAAACGCTAAATATTGACCTATGTGGAAATACTTCTAATATAGAGCTGACTGCTTCCAGCACCTTTGAATTAGCAAGTGTACTTCAAAAGAAAACGTTAACGATGAAAAGATGAATGAGGCCGAAGCGAGACTCGTCTTTTAAGGCGTACTGAAGTAAGACTGCATATGATGCTGCTCTGTCCGTTTAGACACAAGCAGCAGATGAAGACACAGGTTTTCAGCCCTCTGTGGTAAAAGAGCCAAAATGCCTCGAGTTTACTGCACTTTAACCCCAACGAGAGAAGGGTGATAGCAAGAGATATCAGTCCCAAAGGCCAAAACTCAAGAGCGCAGAGGCTGTTCCCTCAGAAAACAAGCAAGTCAGCAAAAGCTTTGACAAGTTAAAAGATGTGAAGGTGTCCAGAAAGGAGCCCACTTTGTTCAAGTATCAACGTTTTAAATTCGCTTTGTTGTTGTTCT

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00072476 True 2675 lncRNA 0.35 2 28462504 28465453

Neighbor

gene id symbol gene type direction distance location
XLOC_036512 cebpb coding downstream 12722 28448267 ~ 28449782 (-)
XLOC_036511 ptpn1 coding downstream 54094 28398780 ~ 28408410 (-)
XLOC_036510 KLHL12 coding downstream 105327 28350921 ~ 28357177 (-)
XLOC_036509 tuba8l coding downstream 112645 28345352 ~ 28349859 (-)
XLOC_036508 kdm5bb coding downstream 120017 28305213 ~ 28342487 (-)
XLOC_036514 NA coding upstream 62876 28528329 ~ 28546676 (-)
XLOC_036515 mc3r coding upstream 188836 28654289 ~ 28655338 (-)
XLOC_036516 NA coding upstream 261421 28726874 ~ 28728007 (-)
XLOC_036517 AL807792.1 coding upstream 1116042 29581495 ~ 29635923 (-)
XLOC_036518 mpeg1.3 coding upstream 1190495 29655948 ~ 29658171 (-)
XLOC_036506 BX664742.1 non-coding downstream 166708 28294476 ~ 28295796 (-)
XLOC_036503 NA non-coding downstream 234148 28169137 ~ 28228356 (-)
XLOC_036501 BX664731.1 non-coding downstream 734418 27727970 ~ 27728086 (-)
XLOC_036498 AL954868.1 non-coding downstream 855551 27596435 ~ 27606953 (-)
XLOC_036497 NA non-coding downstream 888421 27551224 ~ 27574083 (-)
XLOC_036520 AL928845.1 non-coding upstream 1223058 29688511 ~ 29698282 (-)
XLOC_036521 NA non-coding upstream 1226257 29691710 ~ 29693950 (-)

Expression


Co-expression Network