XLOC_036517 (AL807792.1)


Basic Information

Item Value
gene id XLOC_036517
gene name AL807792.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007119.7
NCBI id CM002892.2
chromosome length 54304671
location 29581495 ~ 29635923 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00071345
TACAAACACTTCTCTTTGCGGTATTTCATAGCTCCAGGTTAagaaaataacatataaaaataaaaacttagcaCTGCATACTATATATAAAATCTCAGAACGTAAATACACGTTAAAGTgaacaacaaataacaaacaaTCGAGTATTTAGTAATTACTTTCACCAACAGAGAGCGCTGCAAGCTAAACTGATCATTAGTTCGCACGCCACTATTTCCAGCCTCGAACCAGGAGGAGAGCGGGAGCACTGCAGGCAAAAGTTATCAGAAGACGGTTGCTGGCTTCAAGATGTTGAGTTGCATATCATGAATCACCAATGTCCATGGTTTCAGcctaaaatcttctttaatgttctgccGAATGAAAAAAGAAATGGATGGCcacaggacTGGAAAACAGTCATCTATCTGAATGCAGATCTCATACTGTGGCCGCAGGACTCCAGACAGCAACAATATATCAATGACACAGCAGACATCTGAAGTGAAAAACGTTTCATCATTTGCTTTTTTCAGGAATGATTAAGACACAAAGCTTAGCAAGTGAAATGGCTTTCTGCACAGCAAAACCCCTCGGGTTCTCTGAACCGCCTGCACGTATGCTCTGGATTGGCAAGTGGTGCGCTATGAAAGTATTTAGGTTTTGTAAGGTTATAGGGTTTGAAAGTATAGGTTTTGTAATTCAAAATGAGGTGGAAGTTGTTTTGATGACTTGTCATATCCAATCATTTTGAGGCACCACTGAAGGAGCATAACGATCAGAGAAACAGAGGAAACAGGGACAAACTAACACCATGGCAtatgcaatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtttcagacacAGAGACACAAGCACAAAGTCAGTCTATAGTTCTGATTCACAGTTCACTCCTGTTAGGCAGGTGTCAAGAAATATCACAAGGAAAAGAGGAAGCAGTCAGGGAGAATTAAAGACAGACACTCGGACACACCAAAGAGAAAGTTTCATCATGCTGAAAGATGGAGGAATGGTTAGGATGTACGTGCCAAAATGACTTTAAGTACAATGATGACAttaacaaaatctgcaaaaaatcaTCTTAATCAGAATTTTAGCCTTGTTTgagaattaaataaaacaaacatcattaacttctaatttaaaaataatattataaataaatatatatatataattatgtcatTTTGTTAAAAACTGCCAAGATTCATATTGTTTTACTGTATTCTTAGCTAATAATATAGAATTATATGACATGAATTTAATTCATATAGAATTTAAtgacatgaatatatatatatatggaccctggaccacaaaaccagtcatatgcacagctagtgtttttcagccaacaatAAACTTCTGTTGAAAGCtcaatgtgactattttcaatggTCACATATTacaattagttaatgttaattaatgcatttaccaacatgaacaaacaatgaacaatacatttactactgtatttttcatgttagttaacgttagttaatgaatatacagtagttcattattagttcatgttaactcacagtgcattaactaatgttaacaagcatggacttggatgttaataatgcattagtaaatgttcaattatgattaataaatactgtacaagtgttgttcatgattagttcattttagtaaatgcattaactaatgaaccttattgtaaagtattaccttttcaattttataaggtttcttttacagcatcaatgttgtgatgtaattattcagttaaatatacttgagcatttatttagttagtcAAGCGTAAAACGATACGAAAGACCGTGTAACCGCTAACGGCATCAGGATCAACAGGCAAGTGC

Function

GO:

id name namespace
GO:0019222 regulation of metabolic process biological_process
GO:0015802 basic amino acid transport biological_process
GO:0060255 regulation of macromolecule metabolic process biological_process
GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding molecular_function

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000096836

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00071345 True 1852 lncRNA 0.35 3 29581495 29635923

Neighbor

gene id symbol gene type direction distance location
XLOC_036516 NA coding downstream 853488 28726874 ~ 28728007 (-)
XLOC_036515 mc3r coding downstream 926157 28654289 ~ 28655338 (-)
XLOC_036514 NA coding downstream 1034819 28528329 ~ 28546676 (-)
XLOC_036513 NA coding downstream 1116042 28462504 ~ 28465453 (-)
XLOC_036512 cebpb coding downstream 1131713 28448267 ~ 28449782 (-)
XLOC_036518 mpeg1.3 coding upstream 20025 29655948 ~ 29658171 (-)
XLOC_036519 prf1.6 coding upstream 34604 29670527 ~ 29677302 (-)
XLOC_036520 AL928845.1 coding upstream 52588 29688511 ~ 29698282 (-)
XLOC_036521 NA coding upstream 55787 29691710 ~ 29693950 (-)
XLOC_036522 prf1.5 coding upstream 65505 29701428 ~ 29706882 (-)
XLOC_036506 BX664742.1 non-coding downstream 1285699 28294476 ~ 28295796 (-)
XLOC_036503 NA non-coding downstream 1353139 28169137 ~ 28228356 (-)
XLOC_036526 NA non-coding upstream 217306 29853229 ~ 29855017 (-)
XLOC_036529 dre-mir-24-3 non-coding upstream 526569 30162492 ~ 30162633 (-)
XLOC_036530 dre-mir-27b non-coding upstream 531512 30167435 ~ 30167525 (-)

Expression


Co-expression Network