G1736133


Basic Information

Item Value
gene id G1736133
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 39296062 ~ 39302368 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1988248
GGCTGTTGTCATACGGATGCACATTGCCCCGCGATTAGAAATGGATTCAtttgaaacagagacagataacCTCGCCTCGAGCGGGACACGGATGGGATGGCATTGGAAATGTCATTGTGCACGAGAGAGATGGATCAAGCCAAGAAGGGGATACCGCTGCTCGAGCGAATCCCTCCACATTAACTTTGGCAAACCCATGCCTCCGCTTGACAATGCTTCGCTCCAAAAGACTGGCTGCTGCGTGGGTGTAGGCGtgaacctattcaaaggacctgagccctaggaccatgccccaggactacctgacatgatgactccttgctgtccccagtccacctggctgtgctgctgctccagtttcaactgttctgccttattattattcgaccatgctggtcatttatgaacatttgaacatcttggccatgttctgttataatctccacccggcacagccagaagaggactggccatcccacatatgctctctctaattctctctttctttctctctctcggaggacctgagccctaggaccatgccccaggaatacctgacatgatgactccttgctgtccccagtccacctgactgtgctgctgctccagtttcaactattctgccttattattattcgaccatgctggtcatttatgaacatttgaacatcttgaccatgttttgttataatctccacccggcacagtcagaagaggactggccaccccacatagcctggttcctctctaggtttcttcctaggttttggcctttctagggagtttttcctagccaccgtgcttctacacctgcattgcttgctgtttggggttttaggctgggtttctgtacagcactttgagatatcagctgatgtacgaagggctatataaataaatttgattt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1988248 True 907 lncRNA 0.49 2 39296062 39302368

Neighbor

gene id symbol gene type direction distance location
nat16l LOC106608945 coding upstream 39465 39245831 ~ 39256597 (+)
LOC110500362 LOC106608944 coding upstream 58145 39228648 ~ 39237917 (+)
nat16 LOC106608942 coding upstream 85027 39179147 ~ 39211035 (+)
LOC118942927 NA coding upstream 141716 39138542 ~ 39154522 (+)
zgc:92664 LOC106608937 coding upstream 273198 39003738 ~ 39022864 (+)
LOC110500364 LOC106608946 coding downstream 20497 39322865 ~ 39331908 (+)
zanl LOC106608949 coding downstream 117762 39420130 ~ 39453254 (+)
trnaw-cca-56 NA coding downstream 268288 39570656 ~ 39570727 (+)
mpdu1b LOC106608952 coding downstream 292799 39595167 ~ 39600315 (+)
acox3 acox3 coding downstream 371604 39673972 ~ 39706202 (+)
G1736093 NA non-coding upstream 104208 39191442 ~ 39191854 (+)
G1735986 NA non-coding upstream 117884 39034509 ~ 39178178 (+)
G1736065 NA non-coding upstream 151746 39143710 ~ 39144316 (+)
G1736042 NA non-coding upstream 190203 39103955 ~ 39105859 (+)
G1736154 ap1s1 non-coding downstream 38270 39340638 ~ 39362957 (+)
G1736209 NA non-coding downstream 148492 39450860 ~ 39451178 (+)
G1736377 NA non-coding downstream 402240 39704608 ~ 39705136 (+)
G1736434 NA non-coding downstream 474063 39776431 ~ 39842962 (+)
G1736473 NA non-coding downstream 556251 39858619 ~ 39858919 (+)
G1736098 NA other upstream 6392 39233664 ~ 39289670 (+)
arrb2b LOC106608931 other upstream 371134 38867935 ~ 38939119 (+)
LOC110500301 LOC106609063 other upstream 1213788 38076983 ~ 38083972 (+)
G1734961 NA other upstream 1249556 38045108 ~ 38046506 (+)
G1736484 LOC106608963 other downstream 573388 39875756 ~ 39876950 (+)
G1737353 NA other downstream 760338 40062706 ~ 40063325 (+)
LOC110500409 LOC106599480 other downstream 1099136 40401452 ~ 40404840 (+)
G1737866 LOC103384823 other downstream 1249643 40552011 ~ 40553853 (+)
G1738057 LOC100194703 other downstream 1690787 40955050 ~ 40997320 (+)

Expression


Co-expression Network