Gene
RNA
| Item | Value |
|---|---|
| gene id | G1740411 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 43462853 ~ 43463081 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1993164 | True | 229 | lncRNA | 0.54 | 1 | 43462853 | 43463081 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110500847 | NA | coding | upstream | 53811 | 43405498 ~ 43409042 (+) |
| LOC118942788 | NA | coding | upstream | 58106 | 43397554 ~ 43404747 (+) |
| LOC110500510 | ccnb1ip1 | coding | upstream | 77775 | 43382881 ~ 43385078 (+) |
| oxa1l | LOC106608836 | coding | upstream | 108416 | 43346414 ~ 43354437 (+) |
| LOC110500504 | NA | coding | upstream | 117074 | 43335680 ~ 43345779 (+) |
| LOC118942933 | NA | coding | downstream | 549772 | 44012853 ~ 44019901 (+) |
| LOC110500517 | LOC106608821 | coding | downstream | 576871 | 44039952 ~ 44050765 (+) |
| pop7 | pop7 | coding | downstream | 634856 | 44097937 ~ 44099926 (+) |
| LOC110500520 | LOC106608811 | coding | downstream | 663001 | 44126082 ~ 44154069 (+) |
| ufsp1 | ufsp1 | coding | downstream | 663593 | 44126674 ~ 44128053 (+) |
| G1740388 | NA | non-coding | upstream | 30692 | 43430283 ~ 43432161 (+) |
| G1740367 | LOC106608832 | non-coding | upstream | 76621 | 43385227 ~ 43386232 (+) |
| G1740345 | NA | non-coding | upstream | 91024 | 43344536 ~ 43371829 (+) |
| G1740340 | NA | non-coding | upstream | 129160 | 43333476 ~ 43333693 (+) |
| G1740408 | NA | non-coding | downstream | 1749 | 43464830 ~ 43466342 (+) |
| G1740415 | LOC106608825 | non-coding | downstream | 12782 | 43475863 ~ 43476299 (+) |
| G1740416 | LOC106608825 | non-coding | downstream | 13948 | 43477029 ~ 43477252 (+) |
| G1740414 | NA | non-coding | downstream | 14328 | 43477409 ~ 43477640 (+) |
| G1740417 | NA | non-coding | downstream | 15400 | 43478481 ~ 43479924 (+) |
| G1740398 | NA | other | upstream | 11686 | 43447050 ~ 43451167 (+) |
| G1740366 | LOC106608832 | other | upstream | 72554 | 43389189 ~ 43390299 (+) |
| G1740312 | r1441 | other | upstream | 135115 | 43255653 ~ 43327738 (+) |
| LOC110500499 | ubil | other | upstream | 194710 | 43267057 ~ 43268143 (+) |
| G1739440 | vax2 | other | upstream | 960496 | 42501349 ~ 42502357 (+) |
| G1740412 | LOC106608825 | other | downstream | 6737 | 43469818 ~ 43470325 (+) |
| G1740453 | NA | other | downstream | 61655 | 43524736 ~ 43526726 (+) |
| G1740752 | NA | other | downstream | 749705 | 44212786 ~ 44213230 (+) |
| LOC110500528 | tmem256 | other | downstream | 983479 | 44446186 ~ 44451532 (+) |
| LOC110500529 | LOC106608720 | other | downstream | 998301 | 44461338 ~ 44480565 (+) |
