G1740430


Basic Information

Item Value
gene id G1740430
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 43492403 ~ 43492659 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1993183
tccaggtgttagaatggccaagtcaaagtccagacctgaatccaatcgagaatctgtggaaagaactgaaaactgctgttcacaaatgctctccatccaacctcactgagctagagctgttttgcaaggaggaatgggaaaacatttcagtctctcgatgtgcaaaactgatagagacataccccaagcgacttacagctgtaatcgcagcaaaaggtggcgctacaaagtattaacttaagggggatgaataattt

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1993183 True 257 lncRNA 0.44 1 43492403 43492659

Neighbor

gene id symbol gene type direction distance location
LOC110500847 NA coding upstream 83361 43405498 ~ 43409042 (+)
LOC118942788 NA coding upstream 87656 43397554 ~ 43404747 (+)
LOC110500510 ccnb1ip1 coding upstream 107325 43382881 ~ 43385078 (+)
oxa1l LOC106608836 coding upstream 137966 43346414 ~ 43354437 (+)
LOC110500504 NA coding upstream 146624 43335680 ~ 43345779 (+)
LOC118942933 NA coding downstream 520194 44012853 ~ 44019901 (+)
LOC110500517 LOC106608821 coding downstream 547293 44039952 ~ 44050765 (+)
pop7 pop7 coding downstream 605278 44097937 ~ 44099926 (+)
LOC110500520 LOC106608811 coding downstream 633423 44126082 ~ 44154069 (+)
ufsp1 ufsp1 coding downstream 634015 44126674 ~ 44128053 (+)
G1740427 NA non-coding upstream 2610 43489578 ~ 43489793 (+)
G1740426 NA non-coding upstream 3868 43488302 ~ 43488535 (+)
G1740425 NA non-coding upstream 4552 43487153 ~ 43487851 (+)
G1740422 NA non-coding upstream 8411 43483674 ~ 43483992 (+)
G1740421 NA non-coding upstream 9792 43482379 ~ 43482611 (+)
G1740431 NA non-coding downstream 139 43492798 ~ 43493115 (+)
G1740432 NA non-coding downstream 1343 43494002 ~ 43494492 (+)
G1740452 NA non-coding downstream 31546 43524205 ~ 43524465 (+)
G1740453 NA non-coding downstream 32077 43524736 ~ 43526726 (+)
G1740457 NA non-coding downstream 41184 43533843 ~ 43534953 (+)
G1740412 LOC106608825 other upstream 22078 43469818 ~ 43470325 (+)
G1740398 NA other upstream 41236 43447050 ~ 43451167 (+)
G1740366 LOC106608832 other upstream 102104 43389189 ~ 43390299 (+)
G1740312 r1441 other upstream 164665 43255653 ~ 43327738 (+)
G1740752 NA other downstream 720127 44212786 ~ 44213230 (+)
LOC110500528 tmem256 other downstream 953901 44446186 ~ 44451532 (+)
LOC110500529 LOC106608720 other downstream 968723 44461338 ~ 44480565 (+)
fcer1g LOC106608748 other downstream 1951868 45444361 ~ 45449712 (+)

Expression


Co-expression Network