G1750049


Basic Information

Item Value
gene id G1750049
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 52120097 ~ 52120307 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2003793
cagccaACTCTCCCCAgaaattcagtgaggatctctgaatgatccaatgttgacctaaatgactaatgaggataaatacaatccacctgtgtgtaatcaagtctccgtataaatgcacctgcactgtgatagtctcagaggtccgttaaaagcgcagagagcatcatgaagaacaaggaacacaccaggcaggtccaagatactgttgtga

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2003793 True 211 lncRNA 0.44 1 52120097 52120307

Neighbor

gene id symbol gene type direction distance location
LOC110500695 LOC106608687 coding upstream 565267 51509283 ~ 51554830 (+)
LOC110500694 LOC106608686 coding upstream 612952 51501598 ~ 51507145 (+)
LOC110500691 LOC106608684 coding upstream 634209 51457228 ~ 51485888 (+)
LOC110500885 LOC106608683 coding upstream 706850 51370721 ~ 51413247 (+)
LOC110500687 LOC106608680 coding upstream 758563 51350884 ~ 51361534 (+)
LOC110500700 LOC106608599 coding downstream 841825 52962132 ~ 52963960 (+)
LOC110500701 LOC106608599 coding downstream 849201 52969508 ~ 52971316 (+)
LOC110500702 LOC106608597 coding downstream 869055 52989362 ~ 52996635 (+)
LOC110500711 LOC106608589 coding downstream 985250 53105557 ~ 53139436 (+)
si:dkey-28a3.2 LOC106608587 coding downstream 1028512 53148819 ~ 53159292 (+)
G1750046 NA non-coding upstream 4145 52115572 ~ 52115952 (+)
G1750043 LOC106608688 non-coding upstream 7873 52111859 ~ 52112224 (+)
G1750032 NA non-coding upstream 20690 52099202 ~ 52099407 (+)
G1750028 NA non-coding upstream 26107 52093776 ~ 52093990 (+)
G1750013 NA non-coding upstream 43666 52072230 ~ 52076431 (+)
G1750055 NA non-coding downstream 3959 52124266 ~ 52124495 (+)
G1750069 LOC106608688 non-coding downstream 34966 52155273 ~ 52155733 (+)
G1750092 NA non-coding downstream 96414 52216721 ~ 52216929 (+)
G1750105 NA non-coding downstream 119408 52239715 ~ 52239990 (+)
G1750108 NA non-coding downstream 140064 52260371 ~ 52260724 (+)
G1750030 LOC106608688 other upstream 24992 52094709 ~ 52095105 (+)
G1750012 NA other upstream 41095 52071600 ~ 52079002 (+)
G1749650 NA other upstream 669622 51418969 ~ 51450475 (+)
G1749651 NA other upstream 756717 51362686 ~ 51363380 (+)
gbrap gbrap other upstream 978089 51134089 ~ 51142008 (+)
G1750050 NA other downstream 70893 52191200 ~ 52197007 (+)
G1751699 LOC106608599 other downstream 842142 52962449 ~ 52972383 (+)
LOC110500722 NA other downstream 1131442 53251413 ~ 53256660 (+)
LOC110500735 ablim2 other downstream 2086391 54206483 ~ 54342581 (+)
G1753100 NA other downstream 2881272 55001579 ~ 55011678 (+)

Expression


Co-expression Network