G1753260


Basic Information

Item Value
gene id G1753260
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 55326893 ~ 55327564 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2007462
tgctgttttcgactctctctaccgcacctgctgtctctaactctgaatgatcggctataaaaagccaactgacatttactcctgaggtgctgacctgttgcatcctcgacaaccactgtgattattattatttgaccctgctggtcatctatgaacgtttgaacatcttggccatgttctgttataatctccacccggtacagccagaagaggactggccacccctcagagcctgtttcctctctacccggcacagccagaagaggactggccacccctcagagcctggttgctctctaggtttcttcctaggttctcttatctccaccctgcacagccagaagaggactggccacccctcatagactggttcctctctacccggcacagccagaagaggactgaccacccctcatagcctggttcctctctaggtttcttcctaggttttggcct

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2007462 True 456 lncRNA 0.52 2 55326893 55327564

Neighbor

gene id symbol gene type direction distance location
LOC110500894 rbpj coding upstream 58233 55170376 ~ 55268660 (+)
LOC110500752 NA coding upstream 177905 55142224 ~ 55148988 (+)
smim20 NA coding upstream 193717 55131968 ~ 55133176 (+)
LOC110500741 LOC106595343 coding upstream 339898 54982792 ~ 54986995 (+)
ccdc96 ccdc96 coding upstream 358825 54966234 ~ 54968068 (+)
LOC110500895 LOC106577483 coding downstream 22351 55349915 ~ 55429706 (+)
LOC118942953 NA coding downstream 128493 55456057 ~ 55473044 (+)
LOC110500896 LOC106591079 coding downstream 146658 55474222 ~ 55476403 (+)
LOC118942951 LOC106608541 coding downstream 148871 55476435 ~ 55478920 (+)
LOC110500897 LOC106591080 coding downstream 174976 55502540 ~ 55505313 (+)
G1753253 NA non-coding upstream 22567 55304124 ~ 55304326 (+)
G1753198 NA non-coding upstream 52922 55272184 ~ 55273971 (+)
G1753201 NA non-coding upstream 55400 55270693 ~ 55271493 (+)
G1753195 NA non-coding upstream 95407 55169049 ~ 55231486 (+)
G1753268 NA non-coding downstream 103080 55430644 ~ 55431306 (+)
G1753269 NA non-coding downstream 104067 55431631 ~ 55432941 (+)
G1753303 NA non-coding downstream 107124 55434688 ~ 55436963 (+)
G1753304 NA non-coding downstream 112824 55440388 ~ 55440754 (+)
LOC118936467 LOC106591080 non-coding downstream 189377 55516569 ~ 55557902 (+)
G1753100 NA other upstream 315215 55001579 ~ 55011678 (+)
LOC110500735 ablim2 other upstream 1019403 54206483 ~ 54342581 (+)
LOC110500722 NA other upstream 2070292 53251413 ~ 53256660 (+)
G1751699 LOC106608599 other upstream 2354510 52962449 ~ 52972383 (+)
G1750050 NA other upstream 3129886 52191200 ~ 52197007 (+)
LOC110500754 LOC106591080 other downstream 263041 55590450 ~ 55592100 (+)
G1755158 NA other downstream 1058843 56386407 ~ 56387622 (+)
G1755570 NA other downstream 1466167 56793731 ~ 56794574 (+)
G1756789 NA other downstream 2598916 57926480 ~ 57928244 (+)
rwdd rwdd4 other downstream 3077720 58405236 ~ 58411726 (+)

Expression


Co-expression Network