G1755545


Basic Information

Item Value
gene id G1755545
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 56738946 ~ 56740602 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2010127
ACACAGCTGTAGGTTCATATAGAGTACACAGCTGTAGGTTCATATAGAGTACACAGCTGTAGGTTCATATAGAGTACACAGCTGTAGGTTTATATAGAGTACACAGCTGTAGGTTTATATAGAGTACACAGCTGTAGGTTCATATAGAGTACACAGCTGTAGGTTCATATAGAGTACACAGCTGTAGGTTCAAATAGAGTACACAGCTGTAGGTTCATATAGAGCACACAGCTGTAGGTTCAAATAGAGTACACAGCTGTAGGTTCATATAGAGCACACAGCTGTAGGTTTATATAGAGTACACAGCTGTAGGTTCAAATAGAGTACACAGCTGTAGGTTCATATAGAGCACACAGCTGTAGGTTCAAATAGAGTACACAGCTGTAGGTTCATATAGAGTACACAGCTGTAGGTTTATATAGAGTACACAGCTGTAGGTTTATATAGAGTACACAGCTGTAGGTTCATATAGAGTACACAGCTGTAGGTTCATATAGAGTACACAGCTGTAGGTTCATACAGAGTACACAGCTGTAGGTTCATATAGAGTACAATCCTTCCTTCACAATCGTCATTGGATTTAGTTCTAGGTGTCTGAGTCATTGAGTATTTCTCAGGGCTGTCATTACTGCAGTTTGGATCAGGGTTCTTCCATTGACAATCAATAGGACCAGGTTCTTCATTTAGAAACCAACCTCTGCCGgtgctctctgtctatctgtcaggTGGAGCACATCATCCCATGGCCACTTACGAG

Function

NR:

description
PREDICTED: extensin-1-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2010127 True 757 lncRNA 0.41 6 56738946 56740602

Neighbor

gene id symbol gene type direction distance location
LOC110500755 LOC106608544 coding upstream 283918 56238529 ~ 56455028 (+)
LOC118942793 LOC106608538 coding upstream 1144284 55592334 ~ 55594662 (+)
LOC110500754 LOC106591080 coding upstream 1146846 55590450 ~ 55592100 (+)
LOC118936467 LOC106591080 coding upstream 1181044 55516569 ~ 55557902 (+)
LOC118942812 NA coding downstream 378133 57118735 ~ 57121924 (+)
LOC118942955 NA coding downstream 471473 57212075 ~ 57232205 (+)
LOC110500761 LOC106608522 coding downstream 1025478 57766080 ~ 57853814 (+)
zgc:194930 LOC106608523 coding downstream 1125370 57865972 ~ 57896896 (+)
per1b LOC106608520 coding downstream 1229706 57970308 ~ 57986158 (+)
G1755525 NA non-coding upstream 39543 56699073 ~ 56699403 (+)
G1755514 NA non-coding upstream 55674 56677976 ~ 56683272 (+)
G1755489 NA non-coding upstream 123903 56614816 ~ 56615043 (+)
G1755384 NA non-coding upstream 222267 56516393 ~ 56516679 (+)
G1755383 NA non-coding upstream 222635 56516048 ~ 56516311 (+)
G1755546 NA non-coding downstream 1555 56742157 ~ 56742683 (+)
G1755561 NA non-coding downstream 25009 56765611 ~ 56766200 (+)
G1755800 NA non-coding downstream 217232 56957834 ~ 57005479 (+)
G1755808 NA non-coding downstream 237063 56977665 ~ 57034431 (+)
G1755799 NA non-coding downstream 252449 56993051 ~ 57007086 (+)
G1755158 NA other upstream 351324 56386407 ~ 56387622 (+)
G1753100 NA other upstream 1727268 55001579 ~ 55011678 (+)
LOC110500735 ablim2 other upstream 2431456 54206483 ~ 54342581 (+)
LOC110500722 NA other upstream 3482345 53251413 ~ 53256660 (+)
G1755570 NA other downstream 53129 56793731 ~ 56794574 (+)
G1756789 NA other downstream 1185878 57926480 ~ 57928244 (+)
rwdd rwdd4 other downstream 1664682 58405236 ~ 58411726 (+)
G1757578 NA other downstream 1942535 58683137 ~ 58686523 (+)
G1758801 NA other downstream 3581613 60322215 ~ 60326620 (+)

Expression


Co-expression Network