G1760644


Basic Information

Item Value
gene id G1760644
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 62865889 ~ 62866143 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2016559
AGTTAGAAGGTCAATAATTAATATCTCTTATGAACCATTAGTTAGAAGGTCAATAATTAATATCTCTTATGAACCATTAGTTAGAAGGTCAATAGTTAATATCTCTTATGAACCATTAGTTAGAAGGTCAATAGTTAATATCTCTtatactttaaacaatgctaccttatataatgttacttaccctacattattcatctcatatgcatacgtatatactgtactctatatcagcgactgtatccttatgtaata

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2016559 True 255 lncRNA 0.28 1 62865889 62866143

Neighbor

gene id symbol gene type direction distance location
LOC110500820 LOC100706866 coding upstream 68507 62772369 ~ 62797382 (+)
txk LOC105031518 coding upstream 257466 62551264 ~ 62608423 (+)
LOC110530874 LOC106578150 coding upstream 400460 62456592 ~ 62465429 (+)
LOC118942972 LOC106592795 coding upstream 422951 62404906 ~ 62442938 (+)
rnf175 rnf175 coding upstream 559977 62272235 ~ 62305912 (+)
LOC110500953 LOC106594432 coding downstream 14655 62873681 ~ 62903536 (+)
LOC118942975 NA coding downstream 53833 62919976 ~ 62921400 (+)
mogat3a LOC105008562 coding downstream 87548 62953691 ~ 62976115 (+)
LOC110500813 tsc22d4 coding downstream 124972 62991115 ~ 63050683 (+)
LOC110500812 LOC106608392 coding downstream 205475 63071618 ~ 63091668 (+)
G1760599 LOC106608419 non-coding upstream 26069 62831878 ~ 62839820 (+)
G1760596 NA non-coding upstream 38926 62824356 ~ 62826963 (+)
G1760594 LOC106581475 non-coding upstream 42574 62822797 ~ 62823315 (+)
G1760592 LOC106608419 non-coding upstream 45889 62819644 ~ 62820000 (+)
G1760591 NA non-coding upstream 46756 62818896 ~ 62819133 (+)
G1760649 NA non-coding downstream 2201 62868344 ~ 62868555 (+)
G1760656 NA non-coding downstream 6055 62872198 ~ 62872513 (+)
G1760658 NA non-coding downstream 6605 62872748 ~ 62872963 (+)
G1760663 NA non-coding downstream 46232 62912375 ~ 62979157 (+)
G1760662 NA non-coding downstream 70526 62936669 ~ 62939488 (+)
G1760587 NA other upstream 51648 62811775 ~ 62814241 (+)
G1760504 NA other upstream 124070 62689513 ~ 62741819 (+)
G1759267 NA other upstream 2055269 60810202 ~ 60810620 (+)
G1759168 LOC101154678 other upstream 2143417 60722158 ~ 60722472 (+)
G1758786 NA other upstream 2506538 60358349 ~ 60359351 (+)
G1760800 NA other downstream 343990 63210133 ~ 63215753 (+)
si:ch73-265d7.2 NA other downstream 501563 63363590 ~ 63372213 (+)
G1760865 NA other downstream 531092 63396272 ~ 63418259 (+)

Expression


Co-expression Network