G1762020


Basic Information

Item Value
gene id G1762020
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 64764616 ~ 64765634 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2018558
CAATGAACCCGACGGTGCTGTTTCTCTATGAACCCGACGGTGCTGTTTCCCAATGAACCCGACGGTGCTGTTTCTCTATGAACCCGACGGTGCTGTTTCCCTATGAACCCGACGGTGCTGTTTCCCAATGAACCCAATGActattagtttaccctgaccagatggactataaatacataacattaccctgaccagatagactataaatacataacattaccctgaccagatggactataaatacataacattaccctgaccagatggactataaatacataacgttaccaattagtttaccctgaccagatggactataaatacataacgttaccctgaccagaaggactataaatacataacattaccctgaccagatggactataaatacataacattaccctgaccagatggactataaatacataacgttaccctgaccagatggactataaatacataacattaccctgaccagatggactataaatacataacattaccctgaccagatggactataaatacataatgttaccctgaccagatggactataaatacataacattaccctgaccagatggactataaatacataacattaccctgaccagatggactataaatacataacgttaccctgaccagatggactataaagaGGACTAAAAGTCAAGaggactaaaggtcaagaggactaaaagTCAATAGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2018558 True 713 lncRNA 0.39 2 64764616 64765634

Neighbor

gene id symbol gene type direction distance location
LOC118942983 NA coding upstream 3658 64754608 ~ 64760958 (+)
LOC110500801 LOC106608413 coding upstream 10094 64734656 ~ 64754522 (+)
LOC118942982 NA coding upstream 50885 64705596 ~ 64715802 (+)
LOC110509408 LOC106592366 coding upstream 59500 64665563 ~ 64705116 (+)
LOC110510008 LOC106562799 coding upstream 184632 64547942 ~ 64579984 (+)
LOC110517355 NA coding downstream 41018 64806646 ~ 64842255 (+)
LOC110498323 LOC105006500 coding downstream 89576 64855210 ~ 64914698 (+)
G1762012 NA non-coding upstream 16560 64746416 ~ 64748056 (+)
G1761915 NA non-coding upstream 136013 64628056 ~ 64628603 (+)
G1761901 NA non-coding upstream 162100 64601987 ~ 64602516 (+)
G1762021 NA non-coding downstream 1547 64767181 ~ 64767393 (+)
G1762022 NA non-coding downstream 7039 64772673 ~ 64773270 (+)
G1762023 NA non-coding downstream 12288 64777922 ~ 64778122 (+)
G1762025 NA non-coding downstream 14130 64779764 ~ 64780172 (+)
G1762028 NA non-coding downstream 21852 64787486 ~ 64787811 (+)
G1761231 NA other upstream 346552 64417437 ~ 64418064 (+)
ctc1 LOC106595900 other upstream 915282 63832555 ~ 63879982 (+)
G1760941 NA other upstream 1213124 63549905 ~ 63551492 (+)
G1762135 NA other downstream 101788 64867422 ~ 64867665 (+)

Expression


Co-expression Network