akap17a (LOC106582227)


Basic Information

Item Value
gene id akap17a
gene name LOC106582227
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 30102878 ~ 30118340 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036959072.1
CGGTAAGTTCAAAGTTCTCTCAACTCGGAAGTTTCTTCGAGTAGCTACATTTGTTGTGCAGAAAACGACAGTTAATTGACGCTTTGTGGACATATTCTAATTTTaacacatacaaacaacaaaaaatacatatatttagcAGCTGGTGAAGCAGTCAGGTCATGATGACCACCCTCGTCCATGACACCACTGAGGCGGTGTGTCTGTGTCAGGAGTACAACCTGTTCCTGAAACCCATCGCCAAGATGACGTTGAGTGTGGCACTGCCCCAGCTGAAGTTGCCTGGGAAGAGCATCTCTAACTGGGAGGTGATGGAGAGGGTGAAGGCCATGGTGGCTCCTGAACAGTTCTCTGCCCTCAGGATCTCTAAGAGCACCATGGACTTTATCCGCTTCGAGGGCGAGGTGGAGAACAGAGGGGTGGTGAAGATCCTACTGGCCAAACTGGATGGCAAGAGCATCAAACTCAGCGGCTTCACTGACATACTCAAGGTGCGTGCAGTGGAGAATAAGATGGACTTCCCAACACGTTATGACTGGGACTCGTTCTTCCGTGACGCCAAGGACATGAACGATACGGTTCCAGGGGAGAGGCCAGACACCATCCGCCTGGAGGGCCTGCCCTGCCGCTGGTTTACCCTGCCTGACGGTCCCCCTGATCGGCCCTCCGAGATGGCCCTGCAGACCATCTTCCAGggctttggtcaggtgCGTCATGTAGACATCCCCATGTTGGACCCGTACAGAGAGGAGACTCTTGATAAGAACTTCAACACCTTCACCTTTGGCGGCCATCTTAACTTTGAGGCGTACGTCCAGTACCAGGAGTACGATGGATTCGCCAAGGCCATGGACACACTGAGAGGCATGAAGCTCATGTACAAAGGAGAGGATGGCAAGGCTGTGGCCTGCAACATCAAGgtGACCTTTGACACCAGTAAACACCTGAGTGACGTGGCTCTGAAGAGACGGCAGCAGGAACGACTGAGAATACTGGagttggagagacagagggaggagctGAAACgcaaggagaaggaggaagaggagagacacaaggaggaggagagGAAACagaaggaggcagaggaggaggaaaaggaacggaggagggaggagaggatacgGAAACGAGAGCAGAAGCTGAGGGaccgggaggagaggaggaacctaaagaaggtgaagaggagacaggaggaagagcagAAGAAGTTGCAGATGAAGATTGCGACAGAGGAGAGAAGGCTGTTGTTGGCTCAGAGGAACCTGGAGTCTATACGCCTTATCGCTGAACTACTGGGCAGGACCaagGCTCTGAAACAGCAAcagcaggagaaggagagagtggagagagaggagcgagagaaagaggagttAGCCAGGCAGAAGGAGGAGTTAGCCCGGCTGGAGCAGCTTGAGGCCTGCAGGCGGGAGCAGGAGGCGGAGTTGAGACGTGTGGAGTTAGAGAAAGGACGTGCCTTGGATCTGCAgcgcagagagagggagctgagGGAGAGACTAGTTGGTAACCTGCTGAAAAaggctggaggagagggagaaaaccAGACCTCCACCCAACCCTCAGCCCTGACCATGCACAAGGGAGACAGCTCCGACCTGAGTAAGACAGGAAGGGCCCTGGGGGTGAACGGGGtgagaccgaggggagaggagagacccaGAGCTATGGTACGATCACACGTCACTGAGaaacagataggagagagggaggagaggcgaggaggcatagaggagaggagaggtaatgaatggagaagcagagaggcgagggagaaacctagagagagggagaggagtcggTCCCATAGCCAGTGTAGGAGGAGGTACAGCCGGAGACGAAGAAGCTCTAGCAGAAAGAGGAGTGAtagtcagaggaggaggagaagtcaTAGTTCTAAGAGGAGAAGTGATAGCAGACGGAGAAGTCGCATTTCTAAGAGGAGAAGCGATAGCAGACGGAGGAGTGGTAGTCGTAGCCACAGGAGAGACAGTCACCATGGACGGGGCTGCAGCAGCAGGAGCACCAGCCATGATTGGAGCAGAAGCTCTAGTGAGAGGAGCCACAGCAGAGGCAGGAGGGGCCATAGACATAGTAGACATAAAGACAGCAGGAGCAGATCTAGTAGCAGCAGCTctaggagtagagagaggagcagggagaaggacaggaggacagagaggagtagAGACTCCAGGAAGCGTAGTAGGAGTCATTCTCGTTCTAGACGACACTAAACGCAgccagaggagacagaagaggacCCTATGCCTGGGTCTAGTTTAAGTGATGCATGGTCAGGCGTTCTAGTATGCTACTGTCTCTGGGCCATATCAgcttcttacacacacacacacacacacacctctttctctctcgcgctctctctcttccccccaatGCTCTTTGTTCATCTCTAGTTGGTTTATTTACTGAATTTTAAAAAATGCTATACTGCTATTATGTTCTGTTTGACACATGTACTGTAGATTGATCACGTGGTGAGTGTGTCTCCTTTGTAGAAAGACATAGAAGAGGGATACAGAAAAAATACTTGATATTTTTCGGGTCACAGTGAATGGCCTGGtttgtatttcagaagaacagctTTAATTGGATTCTGGGAATTGTAGTTAAGTATTAATGCTTCAGCAGGATGCAGGGATCTGTAGTTCTATGGGAAAATGTCAGTCTAGTACAGTAAATAGACAGCTGTAGTTTAAGTCAAGCTTTTTACCCTAGGAtaaagtagggggggggggtgttaaacAACTGACCGACGTtggttcaattacttgaattctATTTAGTTTCTGCCGTTTTTCTAGAGAGAAATCGAATCCAAAGACTTACAGGCTAAAGATGACCAGATGTCATGTTTCTGAGTTCCACGTTTGACCACCAGACGAGACTGTAGTTTTAGTTCTAACCTGGTTAAATGATAATGTTACTATGGCTTCTCCTCcctcggaactagaagcacaagcatttcgctacactcgcaataacatctgctaaccatgtgtatgtgaccaatagaatttgatttgataatgtcATAAATATAAAGTGTGTGATTTAAAGTTCAGTGTCAGCCCTGTTCTGGTGACTCTGTGTTTAACAGCACCCACCCCAGACGGAAGCCTAGTTTCACCATGTTCATTATTTTAATGGTGTCCCTGCTAAAGTTCTGTGGATAAGAACATTTTAAGTTGCCTTATTGATGAAAGTATGTAAAACAGAGCAGAGTGGTGTTAGTGTGTAATGTTGTATATAGGTTGTATAAAGGTCAGGGTGTCAGGAGGCTCATCAGTCTGTACTGTATATTCTCATGTTTCTCTGCTCTGATGGGCGGCAGCATGTCTTCAACACACTTGTCATTTTATTTGTTGTAATAAAGAACCTACAAAAAAgta

Function

NR:

description
A-kinase anchor protein 17A-like

GO: NA

KEGG:

id description
K13169 AKAP17, SFRS17; A-kinase anchor protein 17

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036959072.1 True 3434 mRNA 0.49 9 30102878 30118340

Neighbor

gene id symbol gene type direction distance location
LOC110501719 LOC106582226 coding upstream 20369 30004681 ~ 30082509 (+)
LOC118943632 LOC100194703 coding upstream 169843 29917773 ~ 29933035 (+)
LOC110501716 LOC106582159 coding upstream 187070 29912281 ~ 29915808 (+)
LOC118943587 NA coding upstream 199205 29894126 ~ 29903673 (+)
LOC110501715 LOC106582169 coding upstream 230777 29858755 ~ 29872101 (+)
LOC110502086 NA coding downstream 2518 30120858 ~ 30125521 (+)
LOC110501723 LOC106582229 coding downstream 60379 30178719 ~ 30203292 (+)
arsh LOC106582230 coding downstream 95324 30213664 ~ 30217941 (+)
LOC110501728 LOC106582235 coding downstream 316983 30435323 ~ 30453758 (+)
LOC110501732 LOC106582240 coding downstream 352072 30470412 ~ 30487614 (+)
G1797984 NA non-coding upstream 67910 30033011 ~ 30034968 (+)
G1797957 NA non-coding upstream 102668 29999911 ~ 30000210 (+)
G1797733 NA non-coding upstream 191566 29910809 ~ 29911312 (+)
G1797693 NA non-coding upstream 250975 29851540 ~ 29851903 (+)
G1797687 NA non-coding upstream 258174 29844077 ~ 29844704 (+)
G1798036 NA non-coding downstream 4150 30122490 ~ 30122745 (+)
G1798038 NA non-coding downstream 7788 30126128 ~ 30126849 (+)
G1798048 NA non-coding downstream 19332 30137672 ~ 30137948 (+)
G1798050 NA non-coding downstream 22426 30140766 ~ 30141329 (+)
G1798003 NA non-coding downstream 29541 30147881 ~ 30150071 (+)
G1797582 NA other upstream 358024 29744192 ~ 29744854 (+)
LOC110501700 LOC106582186 other upstream 1092605 28997763 ~ 29010281 (+)
LOC110502085 LOC106582160 other upstream 1118652 28977890 ~ 28984226 (+)
G1795550 NA other upstream 2010762 28091565 ~ 28092116 (+)
G1798168 NA other downstream 382316 30500656 ~ 30545954 (+)
G1798397 NA other downstream 770321 30888661 ~ 30891067 (+)
G1798579 NA other downstream 1128141 31246481 ~ 31292205 (+)
G1798597 NA other downstream 1175212 31293552 ~ 31297419 (+)
LOC110501767 LOC106582273 other downstream 2249296 32317123 ~ 32374208 (+)

Expression


Co-expression Network