LOC110502086


Basic Information

Item Value
gene id LOC110502086
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 30120858 ~ 30125521 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021579969.2
ATGGAAGGCTTCCTGGTCTCCAAGACCCTGTTTACAGTGTGTGAGATGGGTTTATTTGATCTGCTGGCCTCGTCACGGCGCCCCCTGTCTCTAGAGGAGGTAGTGCAGGTAATCAGGGCCAGCCTGAGCGGTACTGAGAAGCTGTATCTGACCCGGTCCATCCACTACAGCTCCAAGACTATCTACCTCTGCTGGCACTACCTGATTGATGCTGTGAGGGAAGGCAGTAACCAGTATGAGAAGGCATTTGGTGTCAAAGTTGATGATTTGTTTGAAGCCATGTACAgACACTGTTTGGGTTGTATAGGTTACCGTGACAACACGATCACCTGGTTTACCCTCTCCGGTGCCAAGGCTGTTTATTCATGTGATTATAATACTTTGATCCTATATTACCCATCACtgcatctatctctctctttaggTTGTAGTGGAGCCCTAGCCAAGAAATGTGTTGACGTACCCAGAATGCAGTTGACGATCTTTGAAATCCAGAGAACACTTTGTTACCGGCGACAACCAGACGATCAGCTTCCAATAAGTTCCACAAAGAGAGAAAGCCAATCAATGACCTCAGACAAAGCGATGGGAGGAGCCCGTAACAAGTTCTATCCCAAGTTATCTTTGCCATTGACTGACAGCATTGTATGTATAGTGGACTTTTTCAAAGATGAGTTGCTAGAAGCTGACCTCTACATTCTGGCGAGAATCCTTCATGACTGGACGGACACACAGCATAGAACTACTGAGAAGTCTACAGGGCCTGCAAACCAACTATACacaccctcctccatccccctctctctccttcagtcattCTCTCTGATGAGAAAGATCAGATGCGATTTGACTCTCCTTACTCTTCCGCACCCCCCTTCTTCGCCTTGGGTGACTGTGTCAACAAAAGCATCCTGTCAGACAAGCCcacaaatacatacatacacacacacacacacacatacacacacacacgcacgcatgcacacacgcacacaatctcTGGCCTTTGAGAGCTCTGCTGTAGCCATAAGCTTGCTacataacacaaacacactcacacacttgcaagtacataacacacacacacacacacacacattctgcatAACAATGAAGATATTGTTTAACCTTCAGCTCAACCTTCTGCTAGAAACAAACAGCAAGCAGCAGTCTGGGTATGACAACTGTCATGACTGACCATGAGAATCCAAAAAGGTCAGATCAGGTTTGCAATTAATCATTTCAATCAGACCCCCTCTTAACTGTAGAGGGGGAAGGAAAGAACTAGTGGGGATTAACAACTCACGTCCTGTTGTAAATTAATAACCTGTTACAGctccccccctactttgtgcaatttccgcctgaagacatacccaaatctaacagcctgtagctc

Function

NR:

description
acetylserotonin O-methyltransferase-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021579969.2 True 1399 mRNA 0.46 5 30120858 30125521

Neighbor

gene id symbol gene type direction distance location
akap17a LOC106582227 coding upstream 2518 30102878 ~ 30118340 (+)
LOC110501719 LOC106582226 coding upstream 38349 30004681 ~ 30082509 (+)
LOC118943632 LOC100194703 coding upstream 187823 29917773 ~ 29933035 (+)
LOC110501716 LOC106582159 coding upstream 205050 29912281 ~ 29915808 (+)
LOC118943587 NA coding upstream 217185 29894126 ~ 29903673 (+)
LOC110501723 LOC106582229 coding downstream 53198 30178719 ~ 30203292 (+)
arsh LOC106582230 coding downstream 88143 30213664 ~ 30217941 (+)
LOC110501728 LOC106582235 coding downstream 309802 30435323 ~ 30453758 (+)
LOC110501732 LOC106582240 coding downstream 344891 30470412 ~ 30487614 (+)
LOC110501730 LOC106582240 coding downstream 380763 30506284 ~ 30519043 (+)
G1797984 NA non-coding upstream 85890 30033011 ~ 30034968 (+)
G1797957 NA non-coding upstream 120648 29999911 ~ 30000210 (+)
G1797733 NA non-coding upstream 209546 29910809 ~ 29911312 (+)
G1797693 NA non-coding upstream 268955 29851540 ~ 29851903 (+)
G1797687 NA non-coding upstream 276154 29844077 ~ 29844704 (+)
G1798038 NA non-coding downstream 607 30126128 ~ 30126849 (+)
G1798048 NA non-coding downstream 12151 30137672 ~ 30137948 (+)
G1798050 NA non-coding downstream 15245 30140766 ~ 30141329 (+)
G1798003 NA non-coding downstream 22360 30147881 ~ 30150071 (+)
G1798055 NA non-coding downstream 33549 30159070 ~ 30159323 (+)
G1797582 NA other upstream 376004 29744192 ~ 29744854 (+)
LOC110501700 LOC106582186 other upstream 1110585 28997763 ~ 29010281 (+)
LOC110502085 LOC106582160 other upstream 1136632 28977890 ~ 28984226 (+)
G1795550 NA other upstream 2028742 28091565 ~ 28092116 (+)
G1798168 NA other downstream 375135 30500656 ~ 30545954 (+)
G1798397 NA other downstream 763140 30888661 ~ 30891067 (+)
G1798579 NA other downstream 1120960 31246481 ~ 31292205 (+)
G1798597 NA other downstream 1168031 31293552 ~ 31297419 (+)
LOC110501767 LOC106582273 other downstream 2242115 32317123 ~ 32374208 (+)

Expression


Co-expression Network