arsh (LOC106582230)


Basic Information

Item Value
gene id arsh
gene name LOC106582230
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 30213664 ~ 30217941 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021579471.2
ACGAAATATCGCACATGCTCCTGTAACTACGGTAAATGGGGGACAGTTGTACAGTGGTGTTACGTCTTCGCAACTTGAATCAATCGCGTTATTGTGTTTCAGAATGAGGCTCTGCTTGCTGGCCCTGTTGCTGCTCCTGgacacaggaagtgatgtcacagcATCAGAGGAGGACAGGAAGCCCAACTTCGTCCTGATGATGGTGGACGACCTTGGCATTGGGGACATCGGTTGTTACGGCAATGACACCATCAGgactccTAATATCGACCGTTTAGCAGCAGAGGGAGTGAAGTTGACTCAGCATATAGCTGCCGCTCCACTCTGTACACCCAGTAGAGCTGCCTTCCACACAGGACGCTACGCACTGCGCTCAGgtctgggCAGTACAGGGCGTGTGCAGGTGTTGTTGTTTCTGGGAGGTTCTGGGGGTCTACCACCCACTGAGACCACCTTCGCTAAGAGACTACAGGAGCAGGGATACACCACCGGACtagtggGTAAATGGCACCTGGGTGTGAACTGTGAGCTTCGAGGGGACCACTGCCACCACCCCAACACACACGGCTTCAGCTACTTCTACGGCCTGCCTTTCACCCTGTTCAATGACTGTAGACCAGGGGAGGGGAAGGATGTACTAGCTGACCTGCAGAACACACTGTGGCAGCTAACACTACTGGGGGCCCTGGCCCTGCTCAGCCTGgtgtgtgtccgtgtgtgtggtCTGCTTGAGGTGAGTGTGTCCGTCATCGTGGCGGTGACTTGTCTGAGCCTACTGGCGTTCAGTGTGTGGTTCGTGCCCTTTGAACTCCTGATGACCTGGAACTGCATCATCATGAGGAACCAGGAAGTGGTGGAGCAGCCGATGGACCTAGACACGTTATCACAAAGACTACTGGGAGAGGCCCAAGGCTTCATAGAGAGGAATGCTGACAGACCGTTCCTCCTGTTCTTGTCTCTGGCCCACGTACacactcctctgttctcctctcctggcTTTGCTGGGAAGAGTCGCCATGGTCTCTATGGAGACAACGTAGAGGAGGTGGACTATATGATAGGTCGTATgactgagacagtggacaggttGGGTCTGGCCAACAACACTATGATGTATTTCACCTCTGACCACGGTGGCCATATTGAAGACGCAGATGAACGAGGACAGAAAGGAGGCTGGAATGGAATCTACAAAGGTGGGAAGGCGATGGGTGGATGGGAGGGTGGTATCAGGGTGCCAGGTATATTCCGGTGGCCTGGCAGGCTGCCAGCAGGCAGAGTGTTTGACACACCCACCAGTCTCATGGACCTCTAccccacactcacacacctggCCGGCGCAACACACAGCGacagGTTGTTAGATGGCTATGATCTGATGCCTGTGCTAGAAGGAAGGACCGAGCGGTCGCAGCATGAGTTCATGTTCCACTATTGTGGTGCTTACCTCAACGCAGTTCGCTGGCACCGACCTGggaGTGAGTCAGTCTATAAGGTCCACTTCTTTACCCCTAACTTCTCCCCACCGGGCGCTGGCGGTTGCTATGACACCAAGATTTGTTTCTGTCATGGAAGTTATGTGACACACCACAGCCCCCCCATCGTCTTTGACCTTCACACTGACCCCTCGGAGTCCCACCCCCTGACCCCAGACACTGAGCCACGCTACCAGGAAGTGCTACAGCAAACTGCCAGGGCCGTGGAGCAGCACCGGGCcaccctcacacactcacacccctcacacacacaaccagacacacactctcctcagTCCGAGCCTGTTCTCAACCAGCTGTCGTGGGAAAAGATTCTGTGGCGTCCATGGCTGCAGCCATGCTGTGGAACATTCCCCTTCTGTGGCTGTACGGAGAACACTACATCTACTCTGgcctaacacacacacctctggcaGAGAAATGTGAAGAGAAAGATGAAGAACATAAAACTATGAAGAACTTTTAATGGAGCAactgctttttaaaaatgttataatATTTTTCACACTAAGTTTTCAATGATGTCTAGACAATTGTACATAGCTATATGAAAGATGGTAATAATTTGCTCAAAGATAATTTATGTTTTGATATCTGGACCAATCTTGTAATTTGCAATATTGATTTTGATAGATTTGTATTTTTATAACCTAAACTGTCTGAacaatctgttttttttcttctttgaaGTTTGTAACTGTACAGTATGCTCCTGTCAGTTACTGCTCTTCACCACATGGTGGAGCCAGCTCCCTGGAATAAACATTCCTTTCTGCTGCA
>XM_036959093.1
attgtgcgctgccctatgggactcccaatcacagccggttgtgatacagtagGAAGGTTAGAGCACCATTTGTCTCTAAGGCTCTGCTTGCTGGCCCTGTTGCTGCTCCTGgacacaggaagtgatgtcacagcATCAGAGGAGGACAGGAAGCCCAACTTCGTCCTGATGATGGTGGACGACCTTGGCATTGGGGACATCGGTTGTTACGGCAATGACACCATCAGgactccTAATATCGACCGTTTAGCAGCAGAGGGAGTGAAGTTGACTCAGCATATAGCTGCCGCTCCACTCTGTACACCCAGTAGAGCTGCCTTCCACACAGGACGCTACGCACTGCGCTCAGgtctgggCAGTACAGGGCGTGTGCAGGTGTTGTTGTTTCTGGGAGGTTCTGGGGGTCTACCACCCACTGAGACCACCTTCGCTAAGAGACTACAGGAGCAGGGATACACCACCGGACtagtggGTAAATGGCACCTGGGTGTGAACTGTGAGCTTCGAGGGGACCACTGCCACCACCCCAACACACACGGCTTCAGCTACTTCTACGGCCTGCCTTTCACCCTGTTCAATGACTGTAGACCAGGGGAGGGGAAGGATGTACTAGCTGACCTGCAGAACACACTGTGGCAGCTAACACTACTGGGGGCCCTGGCCCTGCTCAGCCTGgtgtgtgtccgtgtgtgtggtCTGCTTGAGGTGAGTGTGTCCGTCATCGTGGCGGTGACTTGTCTGAGCCTACTGGCGTTCAGTGTGTGGTTCGTGCCCTTTGAACTCCTGATGACCTGGAACTGCATCATCATGAGGAACCAGGAAGTGGTGGAGCAGCCGATGGACCTAGACACGTTATCACAAAGACTACTGGGAGAGGCCCAAGGCTTCATAGAGAGGAATGCTGACAGACCGTTCCTCCTGTTCTTGTCTCTGGCCCACGTACacactcctctgttctcctctcctggcTTTGCTGGGAAGAGTCGCCATGGTCTCTATGGAGACAACGTAGAGGAGGTGGACTATATGATAGGTCGTATgactgagacagtggacaggttGGGTCTGGCCAACAACACTATGATGTATTTCACCTCTGACCACGGTGGCCATATTGAAGACGCAGATGAACGAGGACAGAAAGGAGGCTGGAATGGAATCTACAAAGGTGGGAAGGCGATGGGTGGATGGGAGGGTGGTATCAGGGTGCCAGGTATATTCCGGTGGCCTGGCAGGCTGCCAGCAGGCAGAGTGTTTGACACACCCACCAGTCTCATGGACCTCTAccccacactcacacacctggCCGGCGCAACACACAGCGacagGTTGTTAGATGGCTATGATCTGATGCCTGTGCTAGAAGGAAGGACCGAGCGGTCGCAGCATGAGTTCATGTTCCACTATTGTGGTGCTTACCTCAACGCAGTTCGCTGGCACCGACCTGggaGTGAGTCAGTCTATAAGGTCCACTTCTTTACCCCTAACTTCTCCCCACCGGGCGCTGGCGGTTGCTATGACACCAAGATTTGTTTCTGTCATGGAAGTTATGTGACACACCACAGCCCCCCCATCGTCTTTGACCTTCACACTGACCCCTCGGAGTCCCACCCCCTGACCCCAGACACTGAGCCACGCTACCAGGAAGTGCTACAGCAAACTGCCAGGGCCGTGGAGCAGCACCGGGCcaccctcacacactcacacccctcacacacacaaccagacacacactctcctcagTCCGAGCCTGTTCTCAACCAGCTGTCGTGGGAAAAGATTCTGTGGCGTCCATGGCTGCAGCCATGCTGTGGAACATTCCCCTTCTGTGGCTGTACGGAGAACACTACATCTACTCTGgcctaacacacacacctctggcaGAGAAATGTGAAGAGAAAGATGAAGAACATAAAACTATGAAGAACTTTTAATGGAGCAactgctttttaaaaatgttataatATTTTTCACACTAAGTTTTCAATGATGTCTAGACAATTGTACATAGCTATATGAAAGATGGTAATAATTTGCTCAAAGATAATTTATGTTTTGATATCTGGACCAATCTTGTAATTTGCAATATTGATTTTGATAGATTTGTATTTTTATAACCTAAACTGTCTGAacaatctgttttttttcttctttgaaGTTTGTAACTGTACAGTATGCTCCTGTCAGTTACTGCTCTTCACCACATGGTGGAGCCAGCTCCCTGGAATAAACATTCCTTTCTGCTGCA

Function

NR:

description
arylsulfatase D-like

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0008484 sulfuric ester hydrolase activity molecular_function

KEGG:

id description
K12374 ARSD_F_H; arylsulfatase D/F/H

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021579471.2 False 2276 mRNA 0.51 11 30213664 30217941
XM_036959093.1 True 2248 mRNA 0.52 11 30214445 30217941

Neighbor

gene id symbol gene type direction distance location
LOC110501723 LOC106582229 coding upstream 10372 30178719 ~ 30203292 (+)
LOC110502086 NA coding upstream 88143 30120858 ~ 30125521 (+)
akap17a LOC106582227 coding upstream 95324 30102878 ~ 30118340 (+)
LOC110501719 LOC106582226 coding upstream 131155 30004681 ~ 30082509 (+)
LOC118943632 LOC100194703 coding upstream 280629 29917773 ~ 29933035 (+)
LOC110501728 LOC106582235 coding downstream 217382 30435323 ~ 30453758 (+)
LOC110501732 LOC106582240 coding downstream 252471 30470412 ~ 30487614 (+)
LOC110501730 LOC106582240 coding downstream 288343 30506284 ~ 30519043 (+)
LOC110501731 LOC106582241 coding downstream 334420 30552361 ~ 30575546 (+)
trnal-caa-106 NA coding downstream 361555 30579496 ~ 30579604 (+)
G1798089 LOC100380853 non-coding upstream 3324 30210119 ~ 30210340 (+)
G1798069 NA non-coding upstream 35677 30177647 ~ 30177987 (+)
G1798068 NA non-coding upstream 37975 30175207 ~ 30175689 (+)
G1798064 NA non-coding upstream 41372 30172066 ~ 30172292 (+)
G1798062 NA non-coding upstream 42952 30170435 ~ 30170712 (+)
G1798095 NA non-coding downstream 31379 30249320 ~ 30249550 (+)
G1798139 NA non-coding downstream 130745 30348686 ~ 30348922 (+)
G1798148 mab21l3 non-coding downstream 181237 30399178 ~ 30400374 (+)
G1798149 mab21l3 non-coding downstream 183732 30401673 ~ 30402698 (+)
G1798191 LOC106581772 non-coding downstream 206138 30424079 ~ 30424311 (+)
G1797582 NA other upstream 468810 29744192 ~ 29744854 (+)
LOC110501700 LOC106582186 other upstream 1203391 28997763 ~ 29010281 (+)
LOC110502085 LOC106582160 other upstream 1229438 28977890 ~ 28984226 (+)
G1795550 NA other upstream 2121548 28091565 ~ 28092116 (+)
G1798168 NA other downstream 282715 30500656 ~ 30545954 (+)
G1798397 NA other downstream 670720 30888661 ~ 30891067 (+)
G1798579 NA other downstream 1028540 31246481 ~ 31292205 (+)
G1798597 NA other downstream 1075611 31293552 ~ 31297419 (+)
LOC110501767 LOC106582273 other downstream 2149695 32317123 ~ 32374208 (+)

Expression


Co-expression Network