Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110502123 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 30707128 ~ 30708451 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_002470299.2 | True | 706 | mRNA | 0.41 | 2 | 30707128 | 30708451 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110501734 | LOC106582244 | coding | upstream | 12222 | 30591869 ~ 30694906 (+) |
| trnal-caa-107 | NA | coding | upstream | 127014 | 30580006 ~ 30580114 (+) |
| trnal-caa-106 | NA | coding | upstream | 127524 | 30579496 ~ 30579604 (+) |
| LOC110501731 | LOC106582241 | coding | upstream | 131582 | 30552361 ~ 30575546 (+) |
| LOC110501730 | LOC106582240 | coding | upstream | 188085 | 30506284 ~ 30519043 (+) |
| LOC110501739 | LOC106582246 | coding | downstream | 205180 | 30913631 ~ 30943931 (+) |
| LOC110501741 | nek5 | coding | downstream | 240205 | 30948656 ~ 30960720 (+) |
| LOC100136146 | LOC106582249 | coding | downstream | 268444 | 30976895 ~ 30995309 (+) |
| rl31 | rl31 | coding | downstream | 291234 | 30999685 ~ 31003643 (+) |
| LOC118943732 | NA | coding | downstream | 294034 | 31002485 ~ 31002621 (+) |
| G1798195 | NA | non-coding | upstream | 274295 | 30432608 ~ 30432833 (+) |
| G1798194 | NA | non-coding | upstream | 274613 | 30428536 ~ 30432515 (+) |
| G1798191 | LOC106581772 | non-coding | upstream | 282817 | 30424079 ~ 30424311 (+) |
| G1798149 | mab21l3 | non-coding | upstream | 304430 | 30401673 ~ 30402698 (+) |
| G1798148 | mab21l3 | non-coding | upstream | 306754 | 30399178 ~ 30400374 (+) |
| G1798403 | sucla2 | non-coding | downstream | 192534 | 30900985 ~ 30901385 (+) |
| G1798446 | NA | non-coding | downstream | 263160 | 30971611 ~ 30971848 (+) |
| G1798447 | NA | non-coding | downstream | 267581 | 30976032 ~ 30976479 (+) |
| G1798473 | NA | non-coding | downstream | 323290 | 31031741 ~ 31031995 (+) |
| G1798474 | NA | non-coding | downstream | 324428 | 31032879 ~ 31033235 (+) |
| G1798168 | NA | other | upstream | 161174 | 30500656 ~ 30545954 (+) |
| LOC118943632 | LOC100194703 | other | upstream | 781746 | 29917773 ~ 29933035 (+) |
| G1797582 | NA | other | upstream | 962274 | 29744192 ~ 29744854 (+) |
| LOC110501700 | LOC106582186 | other | upstream | 1696855 | 28997763 ~ 29010281 (+) |
| LOC110502085 | LOC106582160 | other | upstream | 1722902 | 28977890 ~ 28984226 (+) |
| G1798397 | NA | other | downstream | 180210 | 30888661 ~ 30891067 (+) |
| G1798579 | NA | other | downstream | 538030 | 31246481 ~ 31292205 (+) |
| G1798597 | NA | other | downstream | 585101 | 31293552 ~ 31297419 (+) |
| LOC110501767 | LOC106582273 | other | downstream | 1659185 | 32317123 ~ 32374208 (+) |
| G1800754 | NA | other | downstream | 2202342 | 32910793 ~ 32914182 (+) |
