LOC110502128 (LOC106582310)


Basic Information

Item Value
gene id LOC110502128
gene name LOC106582310
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 37839001 ~ 37840676 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021579996.2
GAGCACTGAGCTGTCACCCCCATCCACCGCCAACATGACTATGGGAAAGATAATCTTCTACGAGGACAGGAACTTCCAGGGTCGCTCTCACGAGTGTAACAGCGACTGTGCCGACCTGCACTCCTACTTCAACCGCTGCAACTCCCTCAGGGTCGAGAGCGGCTGCTTCATGGTCTACGAGCGCCCCAACTACATGGGAAACCAGTACTttgtgaggaggggagagtacCCCGATAACCAGCGAATGATTGGCATCAACGACTGCATCAGGTCCTGCCGTATGATCCCCATGCACCGCGGCAACTACAAAATGAGAATGTACGATCGTCCTGACATGGGCGGCCAGATGAACGAGCTGAGCGACGACTGCCCCAATGTCCAGGACCGTTTCCGTATGTCCGACATCAACTCCTGCAACGTGATGGACGGCCACTGGCTGATGTACGACCAGCCCAACTACAAGGGAAGGCAGTACTATGTGAGGCCCGGTGAGTACAGGAGGTTCAGCGACTGGGGTGGCCAGAGCCCCAAGATCGGCTCCCTCAGAAGGATCACCGACTTCAACTAAACCACAGCGCCATTTTAAACTATCAACTGTCACTCTGTCCACAATAAACTTTGATTCgtaatcaaaaaca

Function

NR:

description
gamma-crystallin M2-like

GO: NA

KEGG:

id description
K23483 CRYG; gamma-crystallin

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021579996.2 True 638 mRNA 0.54 3 37839001 37840676

Neighbor

gene id symbol gene type direction distance location
LOC110502140 LOC106582322 coding downstream 3829 37834053 ~ 37835172 (-)
LOC110502127 LOC106582319 coding downstream 7516 37830542 ~ 37831485 (-)
LOC110501821 LOC106582326 coding downstream 38910 37798979 ~ 37800091 (-)
LOC118943607 LOC106582311 coding downstream 59361 37779271 ~ 37779640 (-)
LOC110501827 LOC106582332 coding downstream 68111 37769660 ~ 37770890 (-)
LOC110501831 LOC106582318 coding upstream 11152 37851828 ~ 37860908 (-)
LOC110502141 LOC106582316 coding upstream 62472 37903148 ~ 37967285 (-)
LOC110501835 LOC106586372 coding upstream 131536 37972212 ~ 37995938 (-)
LOC110501838 LOC100136430 coding upstream 164153 38004829 ~ 38012137 (-)
LOC110501839 rftn2 coding upstream 188826 38029502 ~ 38063991 (-)
G1807030 NA non-coding downstream 64477 37774208 ~ 37774524 (-)
G1807018 NA non-coding downstream 79866 37758858 ~ 37759135 (-)
LOC110502101 LOC106582334 non-coding downstream 257636 37576415 ~ 37723467 (-)
LOC110501819 LOC106582336 non-coding downstream 263067 37545726 ~ 37575934 (-)
G1806717 NA non-coding downstream 299502 37539300 ~ 37539499 (-)
G1807074 NA non-coding upstream 7357 37848033 ~ 37848768 (-)
G1807075 NA non-coding upstream 9425 37850101 ~ 37850374 (-)
G1807587 LOC100380630 non-coding upstream 24288 37864964 ~ 37866937 (-)
G1807588 NA non-coding upstream 32091 37872767 ~ 37873860 (-)
G1807020 LOC105030512 other downstream 78753 37759971 ~ 37760248 (-)
G1806449 NA other downstream 726527 37043561 ~ 37112474 (-)
G1806393 NA other downstream 902914 36935658 ~ 36936087 (-)
LOC110501806 sema5b other downstream 1260290 36552698 ~ 36837583 (-)
G1805927 LOC106582360 other downstream 1779233 36057844 ~ 36059768 (-)
G1807750 LOC106582372 other upstream 352746 38193422 ~ 38195096 (-)
G1807731 NA other upstream 368114 38208790 ~ 38241273 (-)
LOC110502145 LOC106586333 other upstream 735190 38520872 ~ 38726596 (-)
G1808299 NA other upstream 1103460 38944136 ~ 38944530 (-)
LOC110501878 LOC106582406 other upstream 2895972 40736648 ~ 40813437 (-)

Expression


Co-expression Network