XLOC_037191


Basic Information

Item Value
gene id XLOC_037191
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007120.7
NCBI id CM002893.2
chromosome length 56459846
location 28341111 ~ 28344611 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00075131
CAGATTCTACCATTTATTACACTTATTACATTCTtaaataaaaatgctccactGAACAGTTCTTGCATAGATATCTTACAATAccaatttaaaaaagaattatgaAACAGACcagtaacaaaaataaatttcatCTTCTTCCTTAATAAAGAACATTACCATACTAACATTATatcatacaaataataatattttaaacactttgtaCAGCAAAAGAACCGATAAAGAAAAACACACAAGgaaagaacagaatagaacaaaaaacaaaacggaGAGGAAGAGTGTGAAGATTACAGGAAGTGAGGGGGTGGAGTGTTAGTGATGTGGCGAGGGAAAGAGGACAGTGAATATGAAGGTCCCTGCTCTAGCGAGAAACtacatgcttcagcctacatATGGCAAAATGTCGTCCTACTTCCATACAGATAAATCAAGATGGCACATAACTgttctatttttctttctttctccctttttttccattttttttttctgatttgtacCTGCTTTACCAACTGGCAGCTTTCTGCGAGATCCATTTATGGATAAAAGAGAGCACCTGTAAAAGCACTGAGGTCTGTTGTTGGCCGGTTGCTCCCTGCTTAGTAATGTCTACGGACATTCATAGGTAAGAAATCGCTGACAGCTGGTAACACGTAACCGGAGGATGACACTGAGGTGACTGTGTTTTAAGGACGTGATTGTGGTTCTGCAGGTGCAGGGTGGGGTAGGTAGGGGTGGGAGGTGAGGAACGCAAAAAGCAGAAAGGAAAGACCCGGTGAAAACCTTACGCACTGACATATCAAGTTTGGACAAACACGGATACAGATGCACTTCAAGATGCAGTATATCCCAAGACAAACGAGTCTCTTCGCTGTCTGCGAGTGACTGGGAACCTATGGATGAATATTCGAATGTACATGCAGATTTAGTCTCTTTTTGGTGCGTCGAAAAAGTTTGTCAAGCTTTATCTATCAAGCTGAAGAATGAATTGCTCCCATGTTCTTGTGATAAGTGCATCTCGAAATGCCACTAAATGTTATGTAGACAATCGACAGCAGTGTCATTCTTAACAGACTAAGCTAGCGGTAACAATGACGAGTGTTATTTATGCAGTGAAATGTTGTTGCAATACAGacgataacaaaaaaataaaacggaAAAGTTGTCACCTCTGACCTTTTATCATAAAATCCCCTTGTGATGTTTCAAGCATCTTTTTCATATAAAATTTAAGCTGCCAAAAGCCTCTTTGAAGCTGAAAAGCAAACGGCTTGGGAAGGGAGCTTCACTGGAAGAGTGCCCAGATCTAGTACACTTAAAATTGTTCCCTTAGAATGTCTTCGAACATTCCTACTGTCATGTAAAATGTTCTGCCACAGCATTGTCTCCGTTTTGAAGTTGTACGGATAACTTGTGGTAGAAAAGGTGGTCTTCTGTACAGCTAAATCAGAATCAAGAGTGTTTTAGAAACATTCGCCTGGATGGTGATTTCTAAGGACATGCGTGACCTGCACTGACTACAGAAGCGCTAGAACCAATGCAACTAATTCGCTGTTTGTTTACGGCTAGGCTTAAAACTCATCCTCAACTTTGCATTCAAACCGTATATTACAAGCACACACACTCGAGACCAAGCCAATGGTCATATAGATGTTCAAGAACGAATCTTAGAAAGCTGGTGTAGGGTACAAGGAGATACTGTGAGAATAATGCAAAATAAgtcttctttctctctttcaacaCCCAGCAGGTTATTTGCAAATGCTTAAATCTTTGGGCAAAGCATCAGGCGCCTGTGCAACTGACTAGACCGCTGCTGTCGCTCGAAGAGTGAGAGATTGGGGGTTTCGAATGGCACTTGATATGTGATCGGATATGTACGGCATGTTGCTTGCTAATGAATTTGATTGGCCTGTTCCATATTCATTTGGTAAAGTCTGGAGCATGTTGGCAGAAGAGAGTTTCATTTGTAATTTTCAATTTGTCACTTTgcactgtattttaaaataagacaGTTACAGTATGTGTATCTTCAGTGTTAAATTTGAAAGCTGAATTCATATATTGATGAAGAAAATGACAggatgcttttgtttttgtccctGTGTTCTTGTTGTTATATCACGTTTGGTGACTGAATGAATCAGAATTGTCTTTTTGTCAAAGCAAAAACTGGAGAGAAGAGCAGTTTTTCATGACTGCTATCTGTGAGGAAAATGGAAATGTAACCCTTTCAAAGCTTTTCTAGCTGTTTGCACATTGTCAGTAATAACCCCATTTGTGAAATTGTGGGATAGTACACAATGCTATTATGACACTGTAGCAATGCACCTTATTTTACAGAAACTCATACGAACAATCGTCACACACAGGGACCGCTTCTTGCGGACAAAAGTGCCACAACCCACAACTGATTGTACATTACTGGAGAGAAACTGATTCATCTCCTATTTTGTCAAAATTTTGGCATGACTTTGCATTTTAACAAAGAAAATTTGTTGGAATGAGAGGAAATCAATTGAAAATGGCGACTAAAATGGTCAAACTGAagaaatggtgtgtgtgtgtgtgtgtgggtctgtgtacgtttgtgtgtgtatatatgtgataGATGAGCTGCCTTCAGCAGGCCTCAAACCAAGAGAAAGGCACCAACTTTTCATTCTGCACCAACTCAGCATTTCTATGCTGAGAGTTTGTGTATTGATCATTAAGCTCCGGTGGTCCCCTAAGGGGAAACTCTGGGATCGTTTAGTAAAGTCTGCCATGATTCTAAACATGTTACTGCTGAATCGTAATCTTCCCTCCACCCTCACAGCCATTAAATCAATGCAGAAGAGTAGGGTCAGTAAGGGAACGCCCTGATTGCGACGCCACGACAGGCTTCACAACCTTGGGGATGatgatatGTCTTTTGG

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00075131 True 2921 lncRNA 0.40 2 28341111 28344611

Neighbor

gene id symbol gene type direction distance location
XLOC_037190 FQ377896.1 coding upstream 92130 28243624 ~ 28248981 (+)
XLOC_037189 fzd5 coding upstream 106667 28232522 ~ 28234444 (+)
XLOC_037188 plekhm3 coding upstream 132562 28140089 ~ 28208549 (+)
XLOC_037187 idh1 coding upstream 210376 28103735 ~ 28130735 (+)
XLOC_037186 CR936357.1 coding upstream 402693 27938302 ~ 27938418 (+)
XLOC_037192 NA coding downstream 54713 28399324 ~ 28403146 (+)
XLOC_037193 NA coding downstream 244246 28588857 ~ 28590308 (+)
XLOC_037194 si:ch73-7i4.1 coding downstream 253966 28598577 ~ 28606714 (+)
XLOC_037195 CU469511.1 coding downstream 287774 28632385 ~ 28632500 (+)
XLOC_037196 zgc:162396 coding downstream 343963 28688574 ~ 28691972 (+)
XLOC_037183 BX511265.3 non-coding upstream 496483 27834445 ~ 27844628 (+)
XLOC_037184 BX511265.2 non-coding upstream 500571 27837062 ~ 27840540 (+)
XLOC_037182 BX511265.5 non-coding upstream 518537 27817925 ~ 27822574 (+)
XLOC_037198 NA non-coding downstream 377376 28721987 ~ 28819753 (+)
XLOC_037199 NA non-coding downstream 471604 28816215 ~ 28818361 (+)

Expression


Co-expression Network