XLOC_037194 (si:ch73-7i4.1)


Basic Information

Item Value
gene id XLOC_037194
gene name si:ch73-7i4.1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007120.7
NCBI id CM002893.2
chromosome length 56459846
location 28598577 ~ 28606714 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00073204
CGGTTCAACGCCAGTTCACCTGATGAGCATCGACATTGAATCAAaAAAAAAATGCCAGGAGGATCAACTTTCAGGAAGTGCCCCCATTGCATGGAGAGACTCAACTGTGCAAATAGAAAGTGCACAAAGTGTGGGAAACTGCTTGATCTGAAATCCAGACAGACAGCAAGAATGAAGGTGTTCCGGGGCCAAGCACAAGAATGGGccaagaaaatgaaaaaatcacGCAATCAAGCAAAGGTTTTTGACAGTAGTGCCCTACTGGTGGAAAAACTGAAGGCCCTTGGATACTTTCCCCTCCTGCTGTGGGGAAAGTAtcatcctcaaaaaaaaaaatggacagcCCAGCTGCAGTGCCCATTTCAGTTGCCAGTTGTTGCACATGGGGTTATGGAAAAGATAATGTGCCTCTTTGAAGGTCTGTTAGAAGcatgTGATCTGGAAAGTGAGGAAGTGGGCCAAGAAAGTACAGGAGAAGAAAAGGAACCAGAACAAGAAATGCAAGATGAAAACCAGAGAGAACAGGCAGAGCAATGTGAGACAGGAGAGACCGAGAGGAGGGATGTCCAAGGAACGGAGATAGAGGAACAAACAAAGGAAGACAGAgtagagagtgagagagagaaaataggAGAAATGGAGGGACAGAAAGAGGGACTGAAAGAACTAGATAGGATGGCCCCAGATGAAGAGAGAGCTCTGACTGAGAATCCTGCTGTCAAAATTGCTGCTAAAAAGAAAAGACATAA
>TCONS_00073205
CGACATTGAATCAAaAAAAAAATGCCAGGAGGATCAACTTTCAGGAAGTGCCCCCATTGCATGGAGAGACTCAACTGTGCAAATAGAAAGTGCACAAAGTGTGGGAAACTGCTTGATCTGAAATCCAGACAGACAGCAAGAATGAAGGTGTTCCGGGGCCAAGCACAAGAATGGGccaagaaaatgaaaaaatcacGCAATCAAGCAAAGGTTTTTGACAGTAGTGCCCTACTGGTGGAAAAACTGAAGGCCCTTGGATACTTTCCCCTCCTGCTGTGGGGAAAGTAtcatcctcaaaaaaaaaaatggacagcCCAGCTGCAGTGCCCATTTCAGTTGCCAGTTGTTGCACATGGGGTTATGGAAAAGATAATGTGCCTCTTTGAAGGTCTGTTAGAAGGAATCCTGCTGTCAAAATTGCTGCTAAAAAGAAAAGACATAAAAGAAGCCAACCCAAGGATGATGcctGCCAGTTTCACAGCAAATTGGAAATTTTTCCAGTACAATATGTGTCCAAGACACGTGAAAACAAGGGCTGTAAAGAAGTACTGGTTCATTGGCACCCGTGCCCATCATGCCAAAAGACCTGGCCCCCATCTTGGGAACCACAGGGGAACATACAAATGACAGTGTCAGGTTGATGCCAACTTTCCTACCACCTAAAATGAGATTAAGAGAAATAGTGTTAATACTAATTATCTCCATTAAAGCTATACATGACTGAATAAAATGGATTTTCTGTCGACAACAAAACACATGATTGTAGCGTTCTGATTGGCAGGTTCAGCCTTTTCATTTCACAGTTCTGGTAATCTGAGTTATAAATATGGAATTGGGAGTTTATATAACAGTATAATTAAAAAGACTGTCAATAAAGTCATAATTGTGAGAACTATATAAAGAAAGTCTGCTAAAAGTTCAGTTGTCACCTTGGTggttcaaataaaaaatgttatttttcccaTGGAACTGTGTTGTGTGGACAAAAATAAAAGTTGAATGGATTGAAA
>TCONS_00075134
aaaaaaaaatggacagcCCAGCTGCAGTGCCCATTTCAGTTGCCAGTTGTTGCACATGGGGTTATGGAAAAGATAATGTGCCTCTTTGAAGGTCTGTTAGAAGGAATCCTGCTGTCAAAATTGCTGCTAAAAAGAAAAGACATAAAAGAAGCCAACCCAAGGATGATGcctGCCAGTTTCACAGCAAATTGGAAATTTTTCCAGTACAATATGTGTCCAAGACACGTGAAAACAAGGGCTGTAAAGAAGTACTGGTTCATTGGCACCCGTGCCCATCATGCCAAAAGACCTGGCCCCCATCTTGGGAACCACAGGGGAACATACAAATGACAGTGTCAGGTTGATGCCAACTTTCCTACCACCTAAAATGAGATTAAGAGAAATAGTGTTAATACTAATTATCTCCATTAAAGCTATACATGACTGAATAAAATGGATTTTCTGTCGACAACAAAACACATGATTGTAGCGTTCTGATTGGCAGGTTCAGCCTTTTCATTTCACAGTTCTGGTAATCTGAGTTATAAATATGGAATTGGGAGTTTATATAACAGTATAATTAAAAAGACTGTCAATAAAGTCATAATTGTGAGAACTATATAAAGAAAGTCTGCTAAAAGTTCAGTTGTCACCTTGGTggttcaaataaaaaatgttatttttcccaTGGAACTGTGTTGTGTGGACAAAAATAAAAGTTGAATGGATTG

Function

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-100921-19 No description available

Ensembl:

ensembl_id ENSDARG00000094554

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00073204 False 749 mRNA 0.45 6 28598577 28604451
TCONS_00073205 False 1010 mRNA 0.40 8 28598607 28606714
TCONS_00075134 True 710 lncRNA 0.38 5 28602139 28606711

Neighbor

gene id symbol gene type direction distance location
XLOC_037193 NA coding upstream 8269 28588857 ~ 28590308 (+)
XLOC_037192 NA coding upstream 195431 28399324 ~ 28403146 (+)
XLOC_037191 NA coding upstream 253966 28341111 ~ 28344611 (+)
XLOC_037190 FQ377896.1 coding upstream 349596 28243624 ~ 28248981 (+)
XLOC_037189 fzd5 coding upstream 364133 28232522 ~ 28234444 (+)
XLOC_037195 CU469511.1 coding downstream 25671 28632385 ~ 28632500 (+)
XLOC_037196 zgc:162396 coding downstream 81860 28688574 ~ 28691972 (+)
XLOC_037197 zgc:162780 coding downstream 86878 28693592 ~ 28696999 (+)
XLOC_037198 NA coding downstream 115273 28721987 ~ 28819753 (+)
XLOC_037199 NA coding downstream 209501 28816215 ~ 28818361 (+)
XLOC_037186 CR936357.1 non-coding upstream 660159 27938302 ~ 27938418 (+)
XLOC_037200 NA non-coding downstream 425702 29032416 ~ 29033972 (+)
XLOC_037204 BX537139.1 non-coding downstream 835779 29442493 ~ 29442609 (+)

Expression


Co-expression Network