G1797590


Basic Information

Item Value
gene id G1797590
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 29685731 ~ 29685986 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2057158
tgtgtgtataaggaagtagttgtggaattgttaggttagattactcgttggttattactgcattgtcggaactagaagcacaagcatttcgctacactcgcattaacatctgctaaccatgtgtatgtgacaaataaaatttgatttgttttgccctgaaatctaaataaatcacagactgtgtcaccatcaaagcatccttacaccataacacctcctcctccatgctttacggtgggaaatacacatgcagaga

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2057158 True 256 lncRNA 0.39 1 29685731 29685986

Neighbor

gene id symbol gene type direction distance location
LOC118943646 NA coding upstream 63657 29621005 ~ 29622074 (+)
LOC110501709 LOC106582175 coding upstream 96648 29500150 ~ 29589083 (+)
tsc22d1 LOC107713726 coding upstream 258325 29340787 ~ 29427406 (+)
LOC110501706 LOC106582180 coding upstream 393156 29290937 ~ 29292575 (+)
LOC110501705 NA coding upstream 421313 29260930 ~ 29264418 (+)
LOC110501715 LOC106582169 coding downstream 172769 29858755 ~ 29872101 (+)
LOC118943587 NA coding downstream 208140 29894126 ~ 29903673 (+)
LOC110501716 LOC106582159 coding downstream 226295 29912281 ~ 29915808 (+)
LOC118943632 LOC100194703 coding downstream 231787 29917773 ~ 29933035 (+)
LOC110501719 LOC106582226 coding downstream 318695 30004681 ~ 30082509 (+)
G1797579 NA non-coding upstream 5551 29679877 ~ 29680180 (+)
G1797575 NA non-coding upstream 7312 29678132 ~ 29678419 (+)
G1797559 NA non-coding upstream 20411 29664920 ~ 29665320 (+)
G1797531 NA non-coding upstream 44193 29641315 ~ 29641538 (+)
G1797530 NA non-coding upstream 44503 29641027 ~ 29641228 (+)
G1797626 NA non-coding downstream 49710 29735696 ~ 29736011 (+)
G1797631 NA non-coding downstream 56495 29742481 ~ 29742773 (+)
G1797632 NA non-coding downstream 57335 29743321 ~ 29743905 (+)
G1797580 NA non-coding downstream 59437 29745423 ~ 29746868 (+)
G1797678 NA non-coding downstream 147079 29833065 ~ 29833383 (+)
LOC110501700 LOC106582186 other upstream 675458 28997763 ~ 29010281 (+)
LOC110502085 LOC106582160 other upstream 701505 28977890 ~ 28984226 (+)
G1795550 NA other upstream 1593615 28091565 ~ 28092116 (+)
LOC110501693 LOC106582057 other upstream 1647653 28036917 ~ 28052019 (+)
G1795411 NA other upstream 1772856 27898367 ~ 27912875 (+)
G1797582 NA other downstream 58206 29744192 ~ 29744854 (+)
G1798168 NA other downstream 814670 30500656 ~ 30545954 (+)
G1798397 NA other downstream 1202675 30888661 ~ 30891067 (+)
G1798579 NA other downstream 1560495 31246481 ~ 31292205 (+)

Expression


Co-expression Network