G1797632


Basic Information

Item Value
gene id G1797632
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 29743321 ~ 29743905 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2057200
GCAGAATCACATGAAAAAGCTTTATTGATACACAGCTTAAACAATGACAAATACAGTGCTTTGCCGTCAAGCTTAGAATGTGTGAAATATTTAGCGATGTCACTAGAAGGGGACAAATAGTAGTGTACTCACTGTTACAACTTCAATCATGAAATATCTTATTTGGCAAAATTATACAAAGAAGTAGGAAAAATACAGGATCCAGTAAACACAGTTTGCCTTCCACGGTGCAGGACAAGACGCTAGTAGAACTGCAACAACGACAGTAACAAAATAGACTTATCTGATAGTACATCTCATACTATGGAGTTCTCTCTGCGGACGCACATTCAGCTTTAAATAACACATTATAGCGGCAGGCAGCCAGGCGGCCTGTGAAGGAGCGCATTGGAATGTACAGTTACACTAAATACATTGATAGATACAGGAGGGCCCGACAGCGACCAGCTGTCTATATGTTTACAATCACAACTCAACAAATAAACATATTACAATCTTCCTctgaaaaaaaatatggataCTGTGTGTTATTGTActgtgacatacagtgccttgcgaaagtattcggccccttgaactttgcga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2057200 True 585 lncRNA 0.39 1 29743321 29743905

Neighbor

gene id symbol gene type direction distance location
LOC118943646 NA coding upstream 121247 29621005 ~ 29622074 (+)
LOC110501709 LOC106582175 coding upstream 154238 29500150 ~ 29589083 (+)
tsc22d1 LOC107713726 coding upstream 315915 29340787 ~ 29427406 (+)
LOC110501706 LOC106582180 coding upstream 450746 29290937 ~ 29292575 (+)
LOC110501705 NA coding upstream 478903 29260930 ~ 29264418 (+)
LOC110501715 LOC106582169 coding downstream 114850 29858755 ~ 29872101 (+)
LOC118943587 NA coding downstream 150221 29894126 ~ 29903673 (+)
LOC110501716 LOC106582159 coding downstream 168376 29912281 ~ 29915808 (+)
LOC118943632 LOC100194703 coding downstream 173868 29917773 ~ 29933035 (+)
LOC110501719 LOC106582226 coding downstream 260776 30004681 ~ 30082509 (+)
G1797631 NA non-coding upstream 548 29742481 ~ 29742773 (+)
G1797626 NA non-coding upstream 7310 29735696 ~ 29736011 (+)
G1797590 NA non-coding upstream 57335 29685731 ~ 29685986 (+)
G1797579 NA non-coding upstream 63141 29679877 ~ 29680180 (+)
G1797575 NA non-coding upstream 64902 29678132 ~ 29678419 (+)
G1797580 NA non-coding downstream 1518 29745423 ~ 29746868 (+)
G1797678 NA non-coding downstream 89160 29833065 ~ 29833383 (+)
G1797680 NA non-coding downstream 91594 29835499 ~ 29836412 (+)
G1797681 NA non-coding downstream 93209 29837114 ~ 29837376 (+)
G1797687 NA non-coding downstream 100172 29844077 ~ 29844704 (+)
LOC110501700 LOC106582186 other upstream 733048 28997763 ~ 29010281 (+)
LOC110502085 LOC106582160 other upstream 759095 28977890 ~ 28984226 (+)
G1795550 NA other upstream 1651205 28091565 ~ 28092116 (+)
LOC110501693 LOC106582057 other upstream 1705243 28036917 ~ 28052019 (+)
G1795411 NA other upstream 1830446 27898367 ~ 27912875 (+)
G1797582 NA other downstream 287 29744192 ~ 29744854 (+)
G1798168 NA other downstream 756751 30500656 ~ 30545954 (+)
G1798397 NA other downstream 1144756 30888661 ~ 30891067 (+)
G1798579 NA other downstream 1502576 31246481 ~ 31292205 (+)

Expression


Co-expression Network